//============================================================================ // Copyright (c) Kitware, Inc. // All rights reserved. // See LICENSE.txt for details. // // This software is distributed WITHOUT ANY WARRANTY; without even // the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR // PURPOSE. See the above copyright notice for more information. //============================================================================ #ifndef vtk_m_cont_DataSet_h #define vtk_m_cont_DataSet_h #include #include #include #include #include #include #include #include namespace vtkm { namespace cont { VTKM_CONT_EXPORT VTKM_CONT std::string& GlobalGhostCellFieldName() noexcept; VTKM_CONT_EXPORT VTKM_CONT const std::string& GetGlobalGhostCellFieldName() noexcept; VTKM_CONT_EXPORT VTKM_CONT void SetGlobalGhostCellFieldName(const std::string& name) noexcept; class VTKM_CONT_EXPORT DataSet { public: DataSet() = default; DataSet(vtkm::cont::DataSet&&) = default; DataSet(const vtkm::cont::DataSet&) = default; vtkm::cont::DataSet& operator=(vtkm::cont::DataSet&&) = default; vtkm::cont::DataSet& operator=(const vtkm::cont::DataSet&) = default; VTKM_CONT void Clear(); /// \brief Get the number of cells contained in this DataSet VTKM_CONT vtkm::Id GetNumberOfCells() const; /// \brief Get the number of points contained in this DataSet /// /// Note: All coordinate systems for a DataSet are expected /// to have the same number of points. VTKM_CONT vtkm::Id GetNumberOfPoints() const; /// \brief Adds a field to the `DataSet`. /// /// Note that the indexing of fields is not the same as the order in which they are /// added, and that adding a field can arbitrarily reorder the integer indexing of /// all the fields. To retrieve a specific field, retrieve the field by name, not by /// integer index. VTKM_CONT void AddField(const Field& field); ///@{ /// \brief Retrieves a field by index. /// /// Note that the indexing of fields is not the same as the order in which they are /// added, and that adding a field can arbitrarily reorder the integer indexing of /// all the fields. To retrieve a specific field, retrieve the field by name, not by /// integer index. This method is most useful for iterating over all the fields of /// a `DataSet` (indexed from `0` to `NumberOfFields() - 1`). VTKM_CONT const vtkm::cont::Field& GetField(vtkm::Id index) const { return this->Fields.GetField(index); } VTKM_CONT vtkm::cont::Field& GetField(vtkm::Id index) { return this->Fields.GetField(index); } ///@} VTKM_CONT bool HasField(const std::string& name, vtkm::cont::Field::Association assoc = vtkm::cont::Field::Association::Any) const { return this->Fields.HasField(name, assoc); } VTKM_CONT bool HasCellField(const std::string& name) const { return (this->Fields.GetFieldIndex(name, vtkm::cont::Field::Association::Cells) != -1); } VTKM_CONT bool HasGhostCellField() const; VTKM_CONT const std::string& GetGhostCellFieldName() const; VTKM_CONT bool HasPointField(const std::string& name) const { return (this->Fields.GetFieldIndex(name, vtkm::cont::Field::Association::Points) != -1); } /// \brief Returns the field that matches the provided name and association. /// /// This method will return -1 if no match for the field is found. /// /// Note that the indexing of fields is not the same as the order in which they are /// added, and that adding a field can arbitrarily reorder the integer indexing of /// all the fields. To retrieve a specific field, retrieve the field by name, not by /// integer index. VTKM_CONT vtkm::Id GetFieldIndex( const std::string& name, vtkm::cont::Field::Association assoc = vtkm::cont::Field::Association::Any) const { return this->Fields.GetFieldIndex(name, assoc); } /// \brief Returns the field that matches the provided name and association. /// /// This method will throw an exception if no match is found. Use `HasField()` to query /// whether a particular field exists. ///@{ VTKM_CONT const vtkm::cont::Field& GetField( const std::string& name, vtkm::cont::Field::Association assoc = vtkm::cont::Field::Association::Any) const { return this->Fields.GetField(name, assoc); } VTKM_CONT vtkm::cont::Field& GetField( const std::string& name, vtkm::cont::Field::Association assoc = vtkm::cont::Field::Association::Any) { return this->Fields.GetField(name, assoc); } ///@} /// \brief Returns the first cell field that matches the provided name. /// /// This method will throw an exception if no match is found. Use `HasCellField()` to query /// whether a particular field exists. ///@{ VTKM_CONT const vtkm::cont::Field& GetCellField(const std::string& name) const { return this->GetField(name, vtkm::cont::Field::Association::Cells); } VTKM_CONT vtkm::cont::Field& GetCellField(const std::string& name) { return this->GetField(name, vtkm::cont::Field::Association::Cells); } ///@} /// \brief Returns the cell field that matches the ghost cell field name. /// /// This method will throw an exception if no match is found. Use `HasGhostCellField()` to query /// whether a particular field exists. ///@{ VTKM_CONT const vtkm::cont::Field& GetGhostCellField() const; ///@} /// \brief Returns the first point field that matches the provided name. /// /// This method will throw an exception if no match is found. Use `HasPointField()` to query /// whether a particular field exists. ///@{ VTKM_CONT const vtkm::cont::Field& GetPointField(const std::string& name) const { return this->GetField(name, vtkm::cont::Field::Association::Points); } VTKM_CONT vtkm::cont::Field& GetPointField(const std::string& name) { return this->GetField(name, vtkm::cont::Field::Association::Points); } ///@} ///@{ /// \brief Adds a point field of a given name to the `DataSet`. /// /// Note that the indexing of fields is not the same as the order in which they are /// added, and that adding a field can arbitrarily reorder the integer indexing of /// all the fields. To retrieve a specific field, retrieve the field by name, not by /// integer index. VTKM_CONT void AddPointField(const std::string& fieldName, const vtkm::cont::UnknownArrayHandle& field) { this->AddField(make_FieldPoint(fieldName, field)); } template VTKM_CONT void AddPointField(const std::string& fieldName, const vtkm::cont::ArrayHandle& field) { this->AddField(make_FieldPoint(fieldName, field)); } template VTKM_CONT void AddPointField(const std::string& fieldName, const std::vector& field) { this->AddField( make_Field(fieldName, vtkm::cont::Field::Association::Points, field, vtkm::CopyFlag::On)); } template VTKM_CONT void AddPointField(const std::string& fieldName, const T* field, const vtkm::Id& n) { this->AddField( make_Field(fieldName, vtkm::cont::Field::Association::Points, field, n, vtkm::CopyFlag::On)); } ///@} ///@{ /// \brief Adds a cell field of a given name to the `DataSet`. /// /// Note that the indexing of fields is not the same as the order in which they are /// added, and that adding a field can arbitrarily reorder the integer indexing of /// all the fields. To retrieve a specific field, retrieve the field by name, not by /// integer index. VTKM_CONT void AddCellField(const std::string& fieldName, const vtkm::cont::UnknownArrayHandle& field) { this->AddField(make_FieldCell(fieldName, field)); } template VTKM_CONT void AddCellField(const std::string& fieldName, const vtkm::cont::ArrayHandle& field) { this->AddField(make_FieldCell(fieldName, field)); } template VTKM_CONT void AddCellField(const std::string& fieldName, const std::vector& field) { this->AddField( make_Field(fieldName, vtkm::cont::Field::Association::Cells, field, vtkm::CopyFlag::On)); } template VTKM_CONT void AddCellField(const std::string& fieldName, const T* field, const vtkm::Id& n) { this->AddField( make_Field(fieldName, vtkm::cont::Field::Association::Cells, field, n, vtkm::CopyFlag::On)); } ///@} /// \brief Sets the name of the field to use for cell ghost levels. /// /// This value can be set regardless of whether such a cell field actually exists. VTKM_CONT void SetGhostCellFieldName(const std::string& name); /// \brief Sets the cell field of the given name as the cell ghost levels. /// /// If a cell field of the given name does not exist, an exception is thrown. VTKM_CONT void SetGhostCellField(const std::string& name); ///@{ /// \brief Sets the ghost cell levels. /// /// A field of the given name is added to the `DataSet`, and that field is set as the cell /// ghost levels. /// /// Note that the indexing of fields is not the same as the order in which they are /// added, and that adding a field can arbitrarily reorder the integer indexing of /// all the fields. To retrieve a specific field, retrieve the field by name, not by /// integer index. VTKM_CONT void SetGhostCellField(const vtkm::cont::Field& field); VTKM_CONT void SetGhostCellField(const std::string& fieldName, const vtkm::cont::UnknownArrayHandle& field); ///@} /// \brief Sets the ghost cell levels to the given array. /// /// A field with the global ghost cell field name (see `GlobalGhostCellFieldName`) is added /// to the `DataSet` and made to be the cell ghost levels. /// /// Note that the indexing of fields is not the same as the order in which they are /// added, and that adding a field can arbitrarily reorder the integer indexing of /// all the fields. To retrieve a specific field, retrieve the field by name, not by /// integer index. VTKM_CONT void SetGhostCellField(const vtkm::cont::UnknownArrayHandle& field); VTKM_DEPRECATED(2.0, "Use SetGhostCellField.") VTKM_CONT void AddGhostCellField(const std::string& fieldName, const vtkm::cont::UnknownArrayHandle& field) { this->SetGhostCellField(fieldName, field); } VTKM_DEPRECATED(2.0, "Use SetGhostCellField.") VTKM_CONT void AddGhostCellField(const vtkm::cont::UnknownArrayHandle& field) { this->SetGhostCellField(field); } VTKM_DEPRECATED(2.0, "Use SetGhostCellField.") VTKM_CONT void AddGhostCellField(const vtkm::cont::Field& field) { this->SetGhostCellField(field); } /// \brief Adds the given `CoordinateSystem` to the `DataSet`. /// /// The coordinate system will also be added as a point field of the same name. /// /// \returns the index assigned to the added coordinate system. VTKM_CONT vtkm::IdComponent AddCoordinateSystem(const vtkm::cont::CoordinateSystem& cs); /// \brief Marks the point field with the given name as a coordinate system. /// /// If no such point field exists or the point field is of the wrong format, an exception /// will be throw. /// /// \returns the index assigned to the added coordinate system. VTKM_CONT vtkm::IdComponent AddCoordinateSystem(const std::string& pointFieldName); VTKM_CONT bool HasCoordinateSystem(const std::string& name) const { return this->GetCoordinateSystemIndex(name) >= 0; } VTKM_CONT vtkm::cont::CoordinateSystem GetCoordinateSystem(vtkm::Id index = 0) const; /// Returns the index for the CoordinateSystem whose /// name matches the provided string. /// Will return -1 if no match is found VTKM_CONT vtkm::IdComponent GetCoordinateSystemIndex(const std::string& name) const; VTKM_CONT const std::string& GetCoordinateSystemName(vtkm::Id index = 0) const; /// Returns the CoordinateSystem that matches the provided name. /// Will throw an exception if no match is found VTKM_CONT vtkm::cont::CoordinateSystem GetCoordinateSystem(const std::string& name) const; template VTKM_CONT void SetCellSet(const CellSetType& cellSet) { VTKM_IS_KNOWN_OR_UNKNOWN_CELL_SET(CellSetType); this->SetCellSetImpl(cellSet); } VTKM_CONT const vtkm::cont::UnknownCellSet& GetCellSet() const { return this->CellSet; } VTKM_CONT vtkm::cont::UnknownCellSet& GetCellSet() { return this->CellSet; } VTKM_CONT vtkm::IdComponent GetNumberOfFields() const { return this->Fields.GetNumberOfFields(); } VTKM_CONT vtkm::IdComponent GetNumberOfCoordinateSystems() const { return static_cast(this->CoordSystemNames.size()); } /// Copies the structure from the source dataset. The structure includes the cellset, /// the coordinate systems, and any ghost layer information. The fields that are not /// part of a coordinate system or ghost layers are left unchanged. VTKM_CONT void CopyStructure(const vtkm::cont::DataSet& source); /// \brief Convert the structures in this data set to expected types. /// /// A `DataSet` object can contain data structures of unknown types. Using the data /// requires casting these data structures to concrete types. It is only possible to /// check a finite number of data structures. /// /// The types checked by default are listed in `vtkm/cont/DefaultTypes.h`, which can /// be configured at compile time. If a `DataSet` contains data not listed there, then /// it is likely going to cause problems pulling the data back out. To get around this /// problem, you can call this method to convert the data to a form that is likely to /// be recognized. This conversion is likely but not guaranteed because not all types /// are convertable to something recognizable. /// VTKM_CONT void ConvertToExpected(); VTKM_CONT void PrintSummary(std::ostream& out) const; private: std::vector CoordSystemNames; vtkm::cont::internal::FieldCollection Fields{ vtkm::cont::Field::Association::WholeDataSet, vtkm::cont::Field::Association::Points, vtkm::cont::Field::Association::Cells }; vtkm::cont::UnknownCellSet CellSet; std::shared_ptr GhostCellName; VTKM_CONT void SetCellSetImpl(const vtkm::cont::UnknownCellSet& cellSet); }; } // namespace cont } // namespace vtkm //============================================================================= // Specializations of serialization related classes /// @cond SERIALIZATION namespace vtkm { namespace cont { /// \brief Specify cell sets to use when serializing a `DataSet`. /// /// Usually when serializing a `DataSet`, it uses a fixed set of standard /// `CellSet` types to serialize. If you are writing an algorithm with a /// custom `CellSet`, you can specify the `CellSet`(s) as the template /// parameter for this class (either as a list of `CellSet`s or in a /// single `vtkm::List` parameter). /// template struct DataSetWithCellSetTypes { vtkm::cont::DataSet DataSet; DataSetWithCellSetTypes() = default; explicit DataSetWithCellSetTypes(const vtkm::cont::DataSet& dataset) : DataSet(dataset) { } }; template struct DataSetWithCellSetTypes> : DataSetWithCellSetTypes { using DataSetWithCellSetTypes::DataSetWithCellSetTypes; }; template struct VTKM_DEPRECATED( 2.1, "Serialize DataSet directly or use DataSetWithCellSetTypes for weird CellSets.") SerializableDataSet : DataSetWithCellSetTypes { using DataSetWithCellSetTypes::DataSetWithCellSetTypes; }; } } // vtkm::cont namespace mangled_diy_namespace { template <> struct VTKM_CONT_EXPORT Serialization { static VTKM_CONT void foo(); static VTKM_CONT void save(BinaryBuffer& bb, const vtkm::cont::DataSet& obj); static VTKM_CONT void load(BinaryBuffer& bb, vtkm::cont::DataSet& obj); }; template struct Serialization> { private: using Type = vtkm::cont::DataSetWithCellSetTypes; public: static VTKM_CONT void save(BinaryBuffer& bb, const Type& serializable) { const auto& dataset = serializable.DataSet; vtkmdiy::save(bb, dataset.GetCellSet().ResetCellSetList(vtkm::List{})); vtkm::IdComponent numberOfFields = dataset.GetNumberOfFields(); vtkmdiy::save(bb, numberOfFields); for (vtkm::IdComponent i = 0; i < numberOfFields; ++i) { vtkmdiy::save(bb, dataset.GetField(i)); } vtkm::IdComponent numberOfCoordinateSystems = dataset.GetNumberOfCoordinateSystems(); vtkmdiy::save(bb, numberOfCoordinateSystems); for (vtkm::IdComponent i = 0; i < numberOfCoordinateSystems; ++i) { vtkmdiy::save(bb, dataset.GetCoordinateSystemName(i)); } } static VTKM_CONT void load(BinaryBuffer& bb, Type& serializable) { auto& dataset = serializable.DataSet; dataset = {}; // clear vtkm::cont::UncertainCellSet> cells; vtkmdiy::load(bb, cells); dataset.SetCellSet(cells); vtkm::IdComponent numberOfFields = 0; vtkmdiy::load(bb, numberOfFields); for (vtkm::IdComponent i = 0; i < numberOfFields; ++i) { vtkm::cont::Field field; vtkmdiy::load(bb, field); dataset.AddField(field); } vtkm::IdComponent numberOfCoordinateSystems = 0; vtkmdiy::load(bb, numberOfCoordinateSystems); for (vtkm::IdComponent i = 0; i < numberOfCoordinateSystems; ++i) { std::string coordName; vtkmdiy::load(bb, coordName); dataset.AddCoordinateSystem(coordName); } } }; template struct Serialization>> : Serialization> { }; VTKM_DEPRECATED_SUPPRESS_BEGIN template struct Serialization> : Serialization> { }; VTKM_DEPRECATED_SUPPRESS_END } // diy /// @endcond SERIALIZATION #endif //vtk_m_cont_DataSet_h