diff --git a/pkgs/development/compilers/julia/1.3.nix b/pkgs/development/compilers/julia/1.3.nix new file mode 100644 index 000000000000..5b1300ba240b --- /dev/null +++ b/pkgs/development/compilers/julia/1.3.nix @@ -0,0 +1,170 @@ +{ stdenv, fetchurl, fetchzip, fetchFromGitHub +# build tools +, gfortran, m4, makeWrapper, patchelf, perl, which, python2 +, cmake +# libjulia dependencies +, libunwind, readline, utf8proc, zlib +# standard library dependencies +, curl, fftwSinglePrec, fftw, gmp, libgit2, mpfr, openlibm, openspecfun, pcre2 +# linear algebra +, openblas, arpack +# Darwin frameworks +, CoreServices, ApplicationServices +}: + +with stdenv.lib; + +# All dependencies must use the same OpenBLAS. +let + arpack_ = arpack; +in +let + arpack = arpack_.override { inherit openblas; }; +in + +let + majorVersion = "1"; + minorVersion = "3"; + maintenanceVersion = "1"; + src_sha256 = "0q9a7yc3b235psrwl5ghyxgwly25lf8n818l8h6bkf2ymdbsv5p6"; + version = "${majorVersion}.${minorVersion}.${maintenanceVersion}"; +in + +stdenv.mkDerivation rec { + pname = "julia"; + inherit version; + + src = fetchzip { + url = "https://github.com/JuliaLang/julia/releases/download/v${majorVersion}.${minorVersion}.${maintenanceVersion}/julia-${majorVersion}.${minorVersion}.${maintenanceVersion}-full.tar.gz"; + sha256 = src_sha256; + }; + + prePatch = '' + export PATH=$PATH:${cmake}/bin + ''; + + patches = [ + ./use-system-utf8proc-julia-1.3.patch + + # Julia recompiles a precompiled file if the mtime stored *in* the + # .ji file differs from the mtime of the .ji file. This + # doesn't work in Nix because Nix changes the mtime of files in + # the Nix store to 1. So patch Julia to accept mtimes of 1. + ./allow_nix_mtime.patch + ]; + + postPatch = '' + patchShebangs . contrib + for i in backtrace cmdlineargs; do + mv test/$i.jl{,.off} + touch test/$i.jl + done + rm stdlib/Sockets/test/runtests.jl && touch stdlib/Sockets/test/runtests.jl + rm stdlib/Distributed/test/runtests.jl && touch stdlib/Distributed/test/runtests.jl + sed -e 's/Invalid Content-Type:/invalid Content-Type:/g' -i ./stdlib/LibGit2/test/libgit2.jl + sed -e 's/Failed to resolve /failed to resolve /g' -i ./stdlib/LibGit2/test/libgit2.jl + ''; + + buildInputs = [ + arpack fftw fftwSinglePrec gmp libgit2 libunwind mpfr + pcre2.dev openblas openlibm openspecfun readline utf8proc + zlib + ] + ++ stdenv.lib.optionals stdenv.isDarwin [CoreServices ApplicationServices] + ; + + nativeBuildInputs = [ curl gfortran m4 makeWrapper patchelf perl python2 which ]; + + makeFlags = + let + arch = head (splitString "-" stdenv.system); + march = { x86_64 = stdenv.hostPlatform.platform.gcc.arch or "x86-64"; i686 = "pentium4"; }.${arch} + or (throw "unsupported architecture: ${arch}"); + # Julia requires Pentium 4 (SSE2) or better + cpuTarget = { x86_64 = "x86-64"; i686 = "pentium4"; }.${arch} + or (throw "unsupported architecture: ${arch}"); + # Julia applies a lot of patches to its dependencies, so for now do not use the system LLVM + # https://github.com/JuliaLang/julia/tree/master/deps/patches + in [ + "ARCH=${arch}" + "MARCH=${march}" + "JULIA_CPU_TARGET=${cpuTarget}" + "PREFIX=$(out)" + "prefix=$(out)" + "SHELL=${stdenv.shell}" + + "USE_SYSTEM_BLAS=1" + "USE_BLAS64=${if openblas.blas64 then "1" else "0"}" + "LIBBLAS=-lopenblas" + "LIBBLASNAME=libopenblas" + + "USE_SYSTEM_LAPACK=1" + "LIBLAPACK=-lopenblas" + "LIBLAPACKNAME=libopenblas" + + "USE_SYSTEM_ARPACK=1" + "USE_SYSTEM_FFTW=1" + "USE_SYSTEM_GMP=1" + "USE_SYSTEM_LIBGIT2=1" + "USE_SYSTEM_LIBUNWIND=1" + + "USE_SYSTEM_MPFR=1" + "USE_SYSTEM_OPENLIBM=1" + "USE_SYSTEM_OPENSPECFUN=1" + "USE_SYSTEM_PATCHELF=1" + "USE_SYSTEM_PCRE=1" + "PCRE_CONFIG=${pcre2.dev}/bin/pcre2-config" + "PCRE_INCL_PATH=${pcre2.dev}/include/pcre2.h" + "USE_SYSTEM_READLINE=1" + "USE_SYSTEM_UTF8PROC=1" + "USE_SYSTEM_ZLIB=1" + + "USE_BINARYBUILDER=0" + ]; + + LD_LIBRARY_PATH = makeLibraryPath [ + arpack fftw fftwSinglePrec gmp libgit2 mpfr openblas openlibm + openspecfun pcre2 + ]; + + enableParallelBuilding = true; + + doCheck = !stdenv.isDarwin; + checkTarget = "testall"; + # Julia's tests require read/write access to $HOME + preCheck = '' + export HOME="$NIX_BUILD_TOP" + ''; + + preBuild = '' + sed -e '/^install:/s@[^ ]*/doc/[^ ]*@@' -i Makefile + sed -e '/[$](DESTDIR)[$](docdir)/d' -i Makefile + export LD_LIBRARY_PATH=${LD_LIBRARY_PATH} + ''; + + postInstall = '' + # Symlink shared libraries from LD_LIBRARY_PATH into lib/julia, + # as using a wrapper with LD_LIBRARY_PATH causes segmentation + # faults when program returns an error: + # $ julia -e 'throw(Error())' + find $(echo $LD_LIBRARY_PATH | sed 's|:| |g') -maxdepth 1 -name '*.${if stdenv.isDarwin then "dylib" else "so"}*' | while read lib; do + if [[ ! -e $out/lib/julia/$(basename $lib) ]]; then + ln -sv $lib $out/lib/julia/$(basename $lib) + fi + done + ''; + + passthru = { + inherit majorVersion minorVersion maintenanceVersion; + site = "share/julia/site/v${majorVersion}.${minorVersion}"; + }; + + meta = { + description = "High-level performance-oriented dynamical language for technical computing"; + homepage = https://julialang.org/; + license = stdenv.lib.licenses.mit; + maintainers = with stdenv.lib.maintainers; [ raskin rob garrison ]; + platforms = [ "i686-linux" "x86_64-linux" "x86_64-darwin" ]; + broken = stdenv.isi686; + }; +} diff --git a/pkgs/development/compilers/julia/use-system-utf8proc-julia-1.3.patch b/pkgs/development/compilers/julia/use-system-utf8proc-julia-1.3.patch new file mode 100644 index 000000000000..63e0ba9ab057 --- /dev/null +++ b/pkgs/development/compilers/julia/use-system-utf8proc-julia-1.3.patch @@ -0,0 +1,24 @@ +--- + src/flisp/Makefile | 6 +++--- + 1 file changed, 3 insertions(+), 3 deletions(-) + + +diff --git a/src/flisp/Makefile b/src/flisp/Makefile +index d97075e..6bebca7 100644 +--- a/src/flisp/Makefile ++++ b/src/flisp/Makefile +@@ -32,9 +32,9 @@ OBJS := $(SRCS:%.c=$(BUILDDIR)/%.o) + DOBJS := $(SRCS:%.c=$(BUILDDIR)/%.dbg.obj) + LLT_release := $(LLT_BUILDDIR)/libsupport.a + LLT_debug := $(LLT_BUILDDIR)/libsupport-debug.a +-LIBFILES_release := $(LLT_release) $(LIBUV) $(LIBUTF8PROC) +-LIBFILES_debug := $(LLT_debug) $(LIBUV) $(LIBUTF8PROC) +-LIBS := ++LIBFILES_release := $(LLT_release) $(LIBUV) ++LIBFILES_debug := $(LLT_debug) $(LIBUV) ++LIBS := $(LIBUTF8PROC) + ifneq ($(OS),WINNT) + LIBS += -lpthread + endif + +-- diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 4728ae975e7d..dcd4a968ccff 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -8538,6 +8538,12 @@ in inherit (darwin.apple_sdk.frameworks) CoreServices ApplicationServices; }; + julia_13 = callPackage ../development/compilers/julia/1.3.nix { + gmp = gmp6; + openblas = openblasCompat; + inherit (darwin.apple_sdk.frameworks) CoreServices ApplicationServices; + }; + julia_1 = julia_10; julia = julia_1;