vtk-m/vtkm/worklet/contourtree_distributed/SpatialDecomposition.h

140 lines
5.6 KiB
C
Raw Normal View History

//============================================================================
// Copyright (c) Kitware, Inc.
// All rights reserved.
// See LICENSE.txt for details.
//
// This software is distributed WITHOUT ANY WARRANTY; without even
// the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
// PURPOSE. See the above copyright notice for more information.
//============================================================================
// Copyright (c) 2018, The Regents of the University of California, through
// Lawrence Berkeley National Laboratory (subject to receipt of any required approvals
// from the U.S. Dept. of Energy). All rights reserved.
//
// Redistribution and use in source and binary forms, with or without modification,
// are permitted provided that the following conditions are met:
//
// (1) Redistributions of source code must retain the above copyright notice, this
// list of conditions and the following disclaimer.
//
// (2) Redistributions in binary form must reproduce the above copyright notice,
// this list of conditions and the following disclaimer in the documentation
// and/or other materials provided with the distribution.
//
// (3) Neither the name of the University of California, Lawrence Berkeley National
// Laboratory, U.S. Dept. of Energy nor the names of its contributors may be
// used to endorse or promote products derived from this software without
// specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
// ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
// WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
// IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT,
// INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
// BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
// DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
// OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED
// OF THE POSSIBILITY OF SUCH DAMAGE.
//
//=============================================================================
//
// This code is an extension of the algorithm presented in the paper:
// Parallel Peak Pruning for Scalable SMP Contour Tree Computation.
// Hamish Carr, Gunther Weber, Christopher Sewell, and James Ahrens.
// Proceedings of the IEEE Symposium on Large Data Analysis and Visualization
// (LDAV), October 2016, Baltimore, Maryland.
//
// The PPP2 algorithm and software were jointly developed by
// Hamish Carr (University of Leeds), Gunther H. Weber (LBNL), and
// Oliver Ruebel (LBNL)
//==============================================================================
#ifndef vtk_m_worklet_contourtree_distributed_spatialdecomposition_h
#define vtk_m_worklet_contourtree_distributed_spatialdecomposition_h
#include <vtkm/Types.h>
#include <vtkm/worklet/contourtree_augmented/Types.h>
// clang-format off
VTKM_THIRDPARTY_PRE_INCLUDE
#include <vtkm/thirdparty/diy/diy.h>
VTKM_THIRDPARTY_POST_INCLUDE
// clang-format on
namespace vtkm
{
namespace worklet
{
namespace contourtree_distributed
{
// --- Helper class to store the spatial decomposition defined by the PartitionedDataSet input data
class SpatialDecomposition
{
public:
VTKM_CONT
SpatialDecomposition(vtkm::Id3 blocksPerDim,
vtkm::Id3 globalSize,
const vtkm::cont::ArrayHandle<vtkm::Id3>& localBlockIndices,
const vtkm::cont::ArrayHandle<vtkm::Id3>& localBlockOrigins,
const vtkm::cont::ArrayHandle<vtkm::Id3>& localBlockSizes)
: BlocksPerDimension(blocksPerDim)
, GlobalSize(globalSize)
, LocalBlockIndices(localBlockIndices)
, LocalBlockOrigins(localBlockOrigins)
, LocalBlockSizes(localBlockSizes)
{
}
inline vtkmdiy::DiscreteBounds GetVTKmDIYBounds() const
{
if (this->NumberOfDimensions() == 2)
{
// may need to change back when porting ot later verison of VTKM/vtkmdiy
vtkmdiy::DiscreteBounds domain(0); //(2);
domain.min[0] = domain.min[1] = 0;
domain.max[0] = static_cast<int>(this->GlobalSize[0]);
domain.max[1] = static_cast<int>(this->GlobalSize[1]);
return domain;
}
else
{
// may need to change back when porting to later version of VTMK/vtkmdiy
vtkmdiy::DiscreteBounds domain(0); //(3);
domain.min[0] = domain.min[1] = domain.min[2] = 0;
domain.max[0] = static_cast<int>(this->GlobalSize[0]);
domain.max[1] = static_cast<int>(this->GlobalSize[1]);
domain.max[2] = static_cast<int>(this->GlobalSize[2]);
return domain;
}
}
inline vtkm::Id NumberOfDimensions() const { return GlobalSize[2] > 1 ? 3 : 2; }
inline vtkm::Id GetGlobalNumberOfBlocks() const
{
return BlocksPerDimension[0] * BlocksPerDimension[1] * BlocksPerDimension[2];
}
inline vtkm::Id GetLocalNumberOfBlocks() const { return LocalBlockSizes.GetNumberOfValues(); }
// Number of blocks along each dimension
vtkm::Id3 BlocksPerDimension;
// Size of the global mesh
vtkm::Id3 GlobalSize;
// Index of the local blocks in x,y,z, i.e., in i,j,k mesh coordinates
vtkm::cont::ArrayHandle<vtkm::Id3> LocalBlockIndices;
// Origin of the local blocks in mesh index space
vtkm::cont::ArrayHandle<vtkm::Id3> LocalBlockOrigins;
// Size of each local block in x, y,z
vtkm::cont::ArrayHandle<vtkm::Id3> LocalBlockSizes;
};
} // namespace contourtree_distributed
} // namespace worklet
} // namespace vtkm
#endif