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https://gitlab.kitware.com/vtk/vtk-m
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5aba6e1be Remove unlicensed data Acked-by: Kitware Robot <kwrobot@kitware.com> Acked-by: Vicente Bolea <vicente.bolea@kitware.com> Merge-request: !3012
113 lines
3.6 KiB
C++
113 lines
3.6 KiB
C++
//============================================================================
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// Copyright (c) Kitware, Inc.
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// All rights reserved.
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// See LICENSE.txt for details.
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//
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// This software is distributed WITHOUT ANY WARRANTY; without even
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// the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
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// PURPOSE. See the above copyright notice for more information.
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//============================================================================
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#include <vtkm/Particle.h>
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#include <vtkm/cont/AssignerPartitionedDataSet.h>
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#include <vtkm/cont/DataSet.h>
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#include <vtkm/cont/EnvironmentTracker.h>
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#include <vtkm/cont/Field.h>
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#include <vtkm/cont/Initialize.h>
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#include <vtkm/cont/PartitionedDataSet.h>
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#include <vtkm/filter/flow/ParticleAdvection.h>
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#include <vtkm/io/VTKDataSetReader.h>
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#include <vtkm/io/VTKDataSetWriter.h>
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#include <mpi.h>
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#include <vtkm/thirdparty/diy/diy.h>
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#include <vtkm/thirdparty/diy/mpi-cast.h>
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void LoadData(std::string& fname, std::vector<vtkm::cont::DataSet>& dataSets, int rank, int nRanks)
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{
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std::string buff;
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std::ifstream is;
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is.open(fname);
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std::cout << "Opening: " << fname << std::endl;
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if (!is)
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{
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std::cout << "File not found! : " << fname << std::endl;
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throw "unknown file: " + fname;
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}
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auto p0 = fname.rfind(".visit");
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if (p0 == std::string::npos)
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throw "Only .visit files are supported.";
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auto tmp = fname.substr(0, p0);
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auto p1 = tmp.rfind("/");
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auto dir = tmp.substr(0, p1);
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std::getline(is, buff);
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auto numBlocks = std::stoi(buff.substr(buff.find("!NBLOCKS ") + 9, buff.size()));
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if (rank == 0)
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std::cout << "numBlocks= " << numBlocks << std::endl;
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int nPer = numBlocks / nRanks;
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int b0 = rank * nPer, b1 = (rank + 1) * nPer;
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if (rank == (nRanks - 1))
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b1 = numBlocks;
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for (int i = 0; i < numBlocks; i++)
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{
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std::getline(is, buff);
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if (i >= b0 && i < b1)
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{
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vtkm::cont::DataSet ds;
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std::string vtkFile = dir + "/" + buff;
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vtkm::io::VTKDataSetReader reader(vtkFile);
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ds = reader.ReadDataSet();
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auto f = ds.GetField("grad").GetData();
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vtkm::cont::ArrayHandle<vtkm::Vec<double, 3>> fieldArray;
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f.AsArrayHandle(fieldArray);
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int n = fieldArray.GetNumberOfValues();
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auto portal = fieldArray.WritePortal();
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for (int ii = 0; ii < n; ii++)
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portal.Set(ii, vtkm::Vec<double, 3>(1, 0, 0));
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dataSets.push_back(ds);
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}
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}
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}
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// Example computing streamlines.
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// An example vector field is available in the vtk-m data directory: rotate-vectors.vtk
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// Example usage:
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// this will advect 200 particles 50 steps using a step size of 0.05
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//
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// Particle_Advection <path-to-data-dir>/rotate-vectors.vtk vec 200 50 0.05 output.vtk
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//
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int main(int argc, char** argv)
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{
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MPI_Init(&argc, &argv);
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auto comm = vtkm::cont::EnvironmentTracker::GetCommunicator();
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int rank = comm.rank();
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int size = comm.size();
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std::string dataFile = argv[1];
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std::vector<vtkm::cont::DataSet> dataSets;
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LoadData(dataFile, dataSets, rank, size);
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vtkm::filter::flow::ParticleAdvection pa;
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vtkm::cont::ArrayHandle<vtkm::Particle> seedArray;
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seedArray = vtkm::cont::make_ArrayHandle({ vtkm::Particle(vtkm::Vec3f(.1f, .1f, .9f), 0),
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vtkm::Particle(vtkm::Vec3f(.1f, .6f, .6f), 1),
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vtkm::Particle(vtkm::Vec3f(.1f, .9f, .1f), 2) });
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pa.SetStepSize(0.001f);
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pa.SetNumberOfSteps(10000);
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pa.SetSeeds(seedArray);
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pa.SetActiveField("grad");
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vtkm::cont::PartitionedDataSet pds(dataSets);
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auto output = pa.Execute(pds);
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output.PrintSummary(std::cout);
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return 0;
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}
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