vtk-m/vtkm/worklet/contourtree_distributed/ContourTreeBlockData.h
2020-12-02 14:29:17 -08:00

140 lines
5.6 KiB
C++

//============================================================================
// Copyright (c) Kitware, Inc.
// All rights reserved.
// See LICENSE.txt for details.
//
// This software is distributed WITHOUT ANY WARRANTY; without even
// the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
// PURPOSE. See the above copyright notice for more information.
//============================================================================
// Copyright (c) 2018, The Regents of the University of California, through
// Lawrence Berkeley National Laboratory (subject to receipt of any required approvals
// from the U.S. Dept. of Energy). All rights reserved.
//
// Redistribution and use in source and binary forms, with or without modification,
// are permitted provided that the following conditions are met:
//
// (1) Redistributions of source code must retain the above copyright notice, this
// list of conditions and the following disclaimer.
//
// (2) Redistributions in binary form must reproduce the above copyright notice,
// this list of conditions and the following disclaimer in the documentation
// and/or other materials provided with the distribution.
//
// (3) Neither the name of the University of California, Lawrence Berkeley National
// Laboratory, U.S. Dept. of Energy nor the names of its contributors may be
// used to endorse or promote products derived from this software without
// specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
// ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
// WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
// IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT,
// INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
// BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
// DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
// OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED
// OF THE POSSIBILITY OF SUCH DAMAGE.
//
//=============================================================================
//
// This code is an extension of the algorithm presented in the paper:
// Parallel Peak Pruning for Scalable SMP Contour Tree Computation.
// Hamish Carr, Gunther Weber, Christopher Sewell, and James Ahrens.
// Proceedings of the IEEE Symposium on Large Data Analysis and Visualization
// (LDAV), October 2016, Baltimore, Maryland.
//
// The PPP2 algorithm and software were jointly developed by
// Hamish Carr (University of Leeds), Gunther H. Weber (LBNL), and
// Oliver Ruebel (LBNL)
//==============================================================================
#ifndef vtk_m_worklet_contourtree_distributed_contourtreeblockdata_h
#define vtk_m_worklet_contourtree_distributed_contourtreeblockdata_h
#include <vtkm/Types.h>
#include <vtkm/worklet/contourtree_augmented/Types.h>
// clang-format off
VTKM_THIRDPARTY_PRE_INCLUDE
#include <vtkm/thirdparty/diy/diy.h>
VTKM_THIRDPARTY_POST_INCLUDE
// clang-format on
namespace vtkm
{
namespace worklet
{
namespace contourtree_distributed
{
template <typename FieldType>
struct ContourTreeBlockData
{
static void* create() { return new ContourTreeBlockData<FieldType>; }
static void destroy(void* b) { delete static_cast<ContourTreeBlockData<FieldType>*>(b); }
// ContourTreeMesh data
vtkm::Id NumVertices;
vtkm::cont::ArrayHandle<FieldType> SortedValue;
vtkm::worklet::contourtree_augmented::IdArrayType GlobalMeshIndex;
vtkm::worklet::contourtree_augmented::IdArrayType Neighbours;
vtkm::worklet::contourtree_augmented::IdArrayType FirstNeighbour;
vtkm::Id MaxNeighbours;
// Block metadata
vtkm::Id3 BlockOrigin; // Origin of the data block
vtkm::Id3 BlockSize; // Extends of the data block
vtkm::Id3 GlobalSize; // Extends of the global mesh
unsigned int ComputeRegularStructure; // pass through augmentation setting
};
} // namespace contourtree_distributed
} // namespace worklet
} // namespace vtkm
namespace vtkmdiy
{
// Struct to serialize ContourBlockData objects (i.e., load/save) needed in parralle for DIY
template <typename FieldType>
struct Serialization<vtkm::worklet::contourtree_distributed::ContourTreeBlockData<FieldType>>
{
static void save(
vtkmdiy::BinaryBuffer& bb,
const vtkm::worklet::contourtree_distributed::ContourTreeBlockData<FieldType>& block)
{
vtkmdiy::save(bb, block.NumVertices);
vtkmdiy::save(bb, block.SortedValue);
vtkmdiy::save(bb, block.GlobalMeshIndex);
vtkmdiy::save(bb, block.Neighbours);
vtkmdiy::save(bb, block.FirstNeighbour);
vtkmdiy::save(bb, block.MaxNeighbours);
vtkmdiy::save(bb, block.BlockOrigin);
vtkmdiy::save(bb, block.BlockSize);
vtkmdiy::save(bb, block.GlobalSize);
vtkmdiy::save(bb, block.ComputeRegularStructure);
}
static void load(vtkmdiy::BinaryBuffer& bb,
vtkm::worklet::contourtree_distributed::ContourTreeBlockData<FieldType>& block)
{
vtkmdiy::load(bb, block.NumVertices);
vtkmdiy::load(bb, block.SortedValue);
vtkmdiy::load(bb, block.GlobalMeshIndex);
vtkmdiy::load(bb, block.Neighbours);
vtkmdiy::load(bb, block.FirstNeighbour);
vtkmdiy::load(bb, block.MaxNeighbours);
vtkmdiy::load(bb, block.BlockOrigin);
vtkmdiy::load(bb, block.BlockSize);
vtkmdiy::load(bb, block.GlobalSize);
vtkmdiy::load(bb, block.ComputeRegularStructure);
}
};
} // namespace mangled_vtkmdiy_namespace
#endif