mirror of
https://gitlab.kitware.com/vtk/vtk-m
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102 lines
3.6 KiB
C++
102 lines
3.6 KiB
C++
//============================================================================
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// Copyright (c) Kitware, Inc.
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// All rights reserved.
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// See LICENSE.txt for details.
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// This software is distributed WITHOUT ANY WARRANTY; without even
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// the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
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// PURPOSE. See the above copyright notice for more information.
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//
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// Copyright 2014 National Technology & Engineering Solutions of Sandia, LLC (NTESS).
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// Copyright 2014 UT-Battelle, LLC.
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// Copyright 2014 Los Alamos National Security.
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//
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// Under the terms of Contract DE-NA0003525 with NTESS,
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// the U.S. Government retains certain rights in this software.
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//
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// Under the terms of Contract DE-AC52-06NA25396 with Los Alamos National
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// Laboratory (LANL), the U.S. Government retains certain rights in
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// this software.
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//============================================================================
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#ifndef vtk_m_worklet_zfp_decompressor_h
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#define vtk_m_worklet_zfp_decompressor_h
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#include <vtkm/Math.h>
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#include <vtkm/cont/Algorithm.h>
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#include <vtkm/cont/ArrayHandle.h>
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#include <vtkm/cont/ArrayHandleConstant.h>
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#include <vtkm/cont/ArrayHandleCounting.h>
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#include <vtkm/cont/AtomicArray.h>
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#include <vtkm/cont/Timer.h>
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#include <vtkm/cont/testing/MakeTestDataSet.h>
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#include <vtkm/worklet/DispatcherMapField.h>
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#include <vtkm/worklet/zfp/ZFPDecode3.h>
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#include <vtkm/worklet/zfp/ZFPTools.h>
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using ZFPWord = vtkm::UInt64;
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#include <stdio.h>
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namespace vtkm
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{
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namespace worklet
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{
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class ZFPDecompressor
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{
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public:
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template <typename Scalar, typename StorageIn, typename StorageOut>
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void Decompress(const vtkm::cont::ArrayHandle<vtkm::Int64, StorageIn>& encodedData,
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vtkm::cont::ArrayHandle<Scalar, StorageOut>& output,
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const vtkm::Float64 requestedRate,
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vtkm::Id3 dims)
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{
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//DataDumpb(data, "uncompressed");
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zfp::ZFPStream stream;
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const vtkm::Int32 topoDims = 3;
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;
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stream.SetRate(requestedRate, topoDims, vtkm::Float64());
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// Check to see if we need to increase the block sizes
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// in the case where dim[x] is not a multiple of 4
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vtkm::Id3 paddedDims = dims;
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// ensure that we have block sizes
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// that are a multiple of 4
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if (paddedDims[0] % 4 != 0)
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paddedDims[0] += 4 - dims[0] % 4;
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if (paddedDims[1] % 4 != 0)
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paddedDims[1] += 4 - dims[1] % 4;
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if (paddedDims[2] % 4 != 0)
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paddedDims[2] += 4 - dims[2] % 4;
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const vtkm::Id four = 4;
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vtkm::Id totalBlocks =
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(paddedDims[0] / four) * (paddedDims[1] / (four) * (paddedDims[2] / four));
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zfp::detail::CalcMem3d(paddedDims, stream.minbits);
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// hopefully this inits/allocates the mem only on the device
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output.Allocate(dims[0] * dims[1] * dims[2]);
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// launch 1 thread per zfp block
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vtkm::cont::ArrayHandleCounting<vtkm::Id> blockCounter(0, 1, totalBlocks);
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// using Timer = vtkm::cont::Timer<vtkm::cont::DeviceAdapterTagSerial>;
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// Timer timer;
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vtkm::worklet::DispatcherMapField<zfp::Decode3> decompressDispatcher(
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zfp::Decode3(dims, paddedDims, stream.maxbits));
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decompressDispatcher.Invoke(blockCounter, output, encodedData);
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// vtkm::Float64 time = timer.GetElapsedTime();
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// size_t total_bytes = output.GetNumberOfValues() * sizeof(vtkm::Float64);
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// vtkm::Float64 gB = vtkm::Float64(total_bytes) / (1024. * 1024. * 1024.);
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// vtkm::Float64 rate = gB / time;
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// std::cout<<"Decompress time "<<time<<" sec\n";
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// std::cout<<"Decompress rate "<<rate<<" GB / sec\n";
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// DataDump(output, "decompressed");
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}
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};
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} // namespace worklet
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} // namespace vtkm
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#endif // vtk_m_worklet_zfp_compressor_h
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