Commit Graph

791 Commits

Author SHA1 Message Date
Oliver Ruebel
1d9f6b37cf Add support for boundary augmentation for MPI optimization 2019-09-12 12:26:01 -04:00
Dave Pugmire
58a587a7f6 Merge branch 'master' of https://gitlab.kitware.com/vtk/vtk-m into particleAdvectionFloatType 2019-09-11 10:38:22 -04:00
Kenneth Moreland
6c136b978e Remove vtkm::BaseComponent
This functionality has been superseded by VecTraits::BaseComponentType.
The new functionality also supports replacing the BaseComponentType.
2019-09-09 13:01:03 -06:00
Kenneth Moreland
07c59fcf72 Update filters with secondary fields to use new policy method
Rather than do a CastAndCall on all possible field types when calling a
worklet with two fields (where they all typically get cast to the same
type as the primary field), use the new mechanism with
ArrayHandleMultiplexer to create one code path.

Also update the ApplyPolicy to accept the Field type, which is used to
determine any additional storage types to support.
2019-09-09 08:19:16 -06:00
Dave Pugmire
bd9bc91ac8 Merge branch 'master' of https://gitlab.kitware.com/vtk/vtk-m into particleAdvectionFloatType 2019-09-09 07:54:02 -04:00
Dave Pugmire
9ca4cc2d01 type cleanup. 2019-09-06 08:14:55 -04:00
Dave Pugmire
dff3845725 Use vtkm::FloatDefault for particle advection code. 2019-09-05 16:57:37 -04:00
Abhishek Yenpure
1df07f7395 Adding testing paths for Curvilinear case
Adding testing paths for curvilinear case

Changing names of interpolation helpers to be consistent

Rectifying interpolation helper error messages to reflect correct
location and types of failures
2019-09-04 16:53:02 -06:00
Abhishek Yenpure
f454912813 Merge branch 'master' of gitlab.kitware.com:vtk/vtk-m into grid_eval_curvilinear_grids 2019-09-04 14:34:32 -06:00
Abhishek Yenpure
1697ca48c5 Adding testing paths for Curvilinear case 2019-09-04 14:33:20 -06:00
Robert Maynard
3b89bc0db2 CellSet classes don't require a name 2019-09-02 10:39:58 -04:00
Robert Maynard
5cd47a7065 DataSetBuilders don't require a cellset name 2019-09-02 09:05:56 -04:00
Robert Maynard
89fa2c0293 Remove multiple vtkm::cont::CellSet from vtkm::cont::DataSet
By removing the ability to have multiple CellSets in a DataSet
we can simplify the following things:

  - Cell Fields now don't require a CellSet name when being constructed
  - Filters don't need to manage what the active cellset is
2019-09-02 09:04:51 -04:00
Kenneth Moreland
75a060a243 Fix cell derivatives for polygon cell shape
For polygon cell shapes (that are not triangles or quadrilaterals),
interpolations are done by finding the center point and creating a
triangle fan around that point. Previously, the gradient was computed in
the same way as interpolation: identifying the correct triangle and
computing the gradient for that triangle.

The problem with that approach is that makes the gradient discontinuous
at the boundaries of this implicit triangle fan. To make things worse,
this discontinuity happens right at each vertex where gradient
calculations happen frequently. This means that when you ask for the
gradient at the vertex, you might get wildly different answers based on
floating point imprecision.

Get around this problem by creating a small triangle around the point in
question, interpolating values to that triangle, and use that for the
gradient. This makes for a smoother gradient transition around these
internal boundaries.
2019-08-29 17:37:42 -06:00
Allison Vacanti
93c5c50b9c Ensure that the serial device is enabled during part of OrientNormals test.
Once #377 is implemented we won't need this, but for now we have to
use the serial connectivity tables while validating the OrientNormals
output. Ensure that the serial device can be used during the validation
stage.
2019-08-26 16:44:24 -04:00
Allison Vacanti
9560c4f633 Limit testing dispatch of atomic array to only atomic types. 2019-08-23 15:40:37 -04:00
Kenneth Moreland
5e2ee3627b Merge topic 'fix-contour-test'
709b12c5b Add checks for size of contour worklet outputs
a3131d4e1 Fix bad normals in contour test

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Li-Ta Lo <ollie@lanl.gov>
Merge-request: !1794
2019-08-22 11:19:15 -04:00
Kenneth Moreland
709b12c5bb Add checks for size of contour worklet outputs 2019-08-22 08:28:53 -06:00
Kenneth Moreland
a3131d4e18 Fix bad normals in contour test
The contour worklet test was experiencing normals that were set to NaN
due to problems with computing the gradient of the original field. It
was determined that the problem was caused by the clip filter creating
degenerate cells because the clip plane exactly intersected the points
of the mesh. Although a problem, we found that this behavior also exists
in existing tools like ParaView and VisIt. Thus, it sounds like a
problem to be pushed off to a later day. Instead, just move the plane a
little bit to get it into general position.
2019-08-21 14:39:51 -06:00
Allison Vacanti
64533c5c82 Rename shadowing typedef in TriangleWinding test. 2019-08-21 15:04:07 -04:00
Kenneth Moreland
1473c12e66 Merge topic 'more-gradient-testing'
c19b312e5 Fix gradient issue at apex of pyramid cells

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Li-Ta Lo <ollie@lanl.gov>
Merge-request: !1785
2019-08-20 17:03:28 -04:00
Kenneth Moreland
c19b312e58 Fix gradient issue at apex of pyramid cells
The gradient is malformed at the apex of a pyramid. To get around this,
steal a trick from the VTK source where in this case interpolate some
values a little bit into the interior of the cell.

Also expand the gradient worklet tests to include all cell types.
2019-08-19 16:40:58 -06:00
Li-Ta Lo
9b0a79f19a let's see if I fixe the one last bug 2019-08-19 14:41:49 -06:00
Li-Ta Lo
e66af369ba removed isosurface example, add clipped tangle to Contour unit test 2019-08-19 13:36:28 -06:00
Li-Ta Lo
0a020c77a8 fixed error in TetrahedralizedExplicit, rename MarchineCubes to Contour 2019-08-19 11:45:58 -06:00
Li-Ta Lo
e9e35159ab change MarchingCubes to Contour that was missed before merge 2019-08-19 08:56:11 -06:00
Li-Ta Lo
c2e29f5c41 Merge branch 'master' into contour_hackathon 2019-08-18 14:49:08 -06:00
Li-Ta Lo
414effa8e8 remove unused contour unit test 2019-08-17 19:26:32 -06:00
Li-Ta Lo
d1fe1c3f38 rename MarchingCubes to Contour 2019-08-17 19:10:57 -06:00
Li-Ta Lo
4e8e250705 new uniform table driven cell classifier 2019-08-15 22:37:52 -06:00
Li-Ta Lo
d82d380979 marching tetrahedra generates triangles 2019-08-15 18:03:53 -06:00
Robert Maynard
031407443d Provide simplified way to construct point and cell fields 2019-08-15 11:03:41 -04:00
Abhishek Yenpure
aefc5faca6 Merge branch 'master' of https://gitlab.kitware.com/vtk/vtk-m into particle_status_merge 2019-08-07 13:06:34 -07:00
Allison Vacanti
5db762ee71 Refactor topology mappings to clarify meaning.
The `From` and `To` nomenclature for topology mapping has been confusing for
both users and developers, especially at lower levels where the intention of
mapping attributes from one element to another is easily conflated with the
concept of mapping indices (which maps in the exact opposite direction).

These identifiers have been renamed to `VisitTopology` and `IncidentTopology`
to clarify the direction of the mapping. The order in which these template
parameters are specified for `WorkletMapTopology` have also been reversed,
since eventually there may be more than one `IncidentTopology`, and having
`IncidentTopology` at the end will allow us to replace it with a variadic
template parameter pack in the future.

Other implementation details supporting these worklets, include `Fetch` tags,
`Connectivity` classes, and methods on the various `CellSet` classes (such as
`PrepareForInput` have also reversed their template arguments. These will need
to be cautiously updated.

The convenience implementations of `WorkletMapTopology` have been renamed for
clarity as follows:

```
WorkletMapPointToCell --> WorkletVisitCellsWithPoints
WorkletMapCellToPoint --> WorkletVisitPointsWithCells
```

The `ControlSignature` tags have been renamed as follows:

```
FieldInTo --> FieldInVisit
FieldInFrom --> FieldInMap
FromCount --> IncidentElementCount
FromIndices --> IncidentElementIndices
```
2019-08-06 11:27:26 -04:00
Abhishek Yenpure
bbe101cf66 Adding changes for validating integrator step 2019-08-05 10:39:25 -07:00
Abhishek Yenpure
e3e71c54a3 Merging Dave's particle status rename changes 2019-08-05 10:58:52 -06:00
Abhishek Yenpure
7906145345 Merge branch 'particleStatusRename' of gitlab.kitware.com:dpugmire/vtk-m into particle_status_merge 2019-08-03 15:27:48 -06:00
Robert Maynard
2eeeafc1f5 Merge topic 'move_invoker_to_cont'
7e04b0511 Move Invoker into vtkm/cont

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Kenneth Moreland <kmorel@sandia.gov>
Merge-request: !1745
2019-08-01 12:36:00 -04:00
Robert Maynard
7e04b0511f Move Invoker into vtkm/cont
The Invoker is a control side object that handles the construction
of the relevant worklet dispatcher. Moving it to control makes it
obvious that it isn't an algorithm itself but a way to launch
worklets.
2019-08-01 12:34:27 -04:00
Allison Vacanti
320a5257ad Add TriangleWinding worklet. 2019-08-01 10:57:58 -04:00
Allison Vacanti
ab627b61d6 Add OrientNormals worklet. 2019-08-01 10:57:58 -04:00
Dave Pugmire
bdf98ff987 Change status types to avoid collision in Windows. 2019-07-31 16:28:22 -06:00
Dave Pugmire
e26e3ef621 Better naming for particle and integrator status 2019-07-31 15:46:04 -06:00
ayenpure
2f2230d1f4 Merge branch 'master' of https://gitlab.kitware.com/vtk/vtk-m into 2DLocators 2019-07-31 15:05:53 -06:00
ayenpure
fc14b6eb63 Adding unit test for integrator boundary problem 2019-07-31 14:47:25 -06:00
Kenneth Moreland
57440239ef Merge topic 'vec-typedefs'
53e868938 Add changedoc for common vec types
0be50c119 Update VTK-m code to use new Vec aliases
b3e295214 Add aliases for common Vec types

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !1743
2019-07-31 16:24:46 -04:00
Kenneth Moreland
0be50c119d Update VTK-m code to use new Vec aliases
Should make the code easier to read.
2019-07-31 12:55:40 -06:00
Dave Pugmire
0527fad6ce fix compiler warning. 2019-07-31 11:41:37 -06:00
Dave Pugmire
f3d060a61f remove prints 2019-07-31 11:06:54 -06:00
Dave Pugmire
19e41efb30 Add new particle status for 'took any steps' 2019-07-31 10:54:39 -06:00