Commit Graph

1819 Commits

Author SHA1 Message Date
Dave Pugmire
3868a5b304 Remove the commented out stack code. 2019-03-15 15:14:09 -04:00
Dave Pugmire
e7066ad94b compiler errors. 2019-03-15 14:46:25 -04:00
Dave Pugmire
de7d9cc27b fix compile errors, remove cudastack hacks. 2019-03-15 13:40:48 -04:00
Dave Pugmire
9b9742f436 Merge branch 'no-recurse-bih' of https://gitlab.kitware.com/kmorel/vtk-m into gridEval 2019-03-15 13:05:39 -04:00
Kenneth Moreland
8127093a2f Add CellLocator to name of BoundingIntervalHierarchy
This will help identify the nature of this object as well as find cell
locator implementations.
2019-03-14 16:13:59 -06:00
Kenneth Moreland
c463bbec93 Add parent index to BIH tree
This will help us traverse back up the tree without a call stack (which
is causing issues on CUDA).
2019-03-14 15:52:47 -06:00
Sujin Philip
24fc4ec944 Fix ArrayHandleGroupVecVariable
Take the const portal for the offsets array for all casses.
2019-03-14 13:54:25 -04:00
Dave Pugmire
6edda87c3a Merge branch 'master' of https://gitlab.kitware.com/vtk/vtk-m into gridEval 2019-03-14 13:40:33 -04:00
Dave Pugmire
533f2e5eb3 Cleanup. 2019-03-14 09:39:56 -04:00
Dave Pugmire
bc10b6dbf1 Add cuda stack code to uniform/rectilinear cellLocators. 2019-03-14 08:10:39 -04:00
Dave Pugmire
26b6021530 fix compile error. 2019-03-14 07:56:45 -04:00
Dave Pugmire
b2d5d66de5 fixes for cuda stack 2019-03-13 16:41:08 -04:00
Dave Pugmire
cfd36bcd5b wrap unit test with cuda stack change. 2019-03-13 11:29:49 -04:00
Dave Pugmire
722d4262e1 extend stacksize 2019-03-13 08:17:54 -04:00
Robert Maynard
40581993a5 Merge topic 'vtkm_cont_Initialize_use_emplace_back'
daee0f696 Initialize uses emplace_back when building unparsed args

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !1571
2019-03-08 15:40:46 -05:00
Robert Maynard
daee0f6967 Initialize uses emplace_back when building unparsed args 2019-03-08 13:48:48 -05:00
Kenneth Moreland
bfe06d6d18 Merge topic 'point-merge'
6aa99aec0 Add ability to remove degenerate cells in CleanGrid
5688375c9 Add point merge capabilities to CleanGrid filter

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Abhishek Yenpure <abhishek@uoregon.edu>
Merge-request: !1558
2019-03-07 20:33:36 -05:00
Dave Pugmire
25fee68e43 Fix src in cmake file error, and explicit ds creator func. 2019-03-07 14:48:26 -05:00
Robert Maynard
a6258b63cf Revert BoundingIntervalHierarchy.hxx back into existence. 2019-03-06 14:08:35 -05:00
Robert Maynard
48dc6509f8 Merge topic 'remove_usage_of_reserved_names'
8114e9e62 VTK-m now doesn't use reserved C++ identifiers

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Allison Vacanti <allison.vacanti@kitware.com>
Merge-request: !1564
2019-03-04 15:25:25 -05:00
Dave Pugmire
2eca1d7a1d Merge branch 'master' of https://gitlab.kitware.com/vtk/vtk-m into gridEval 2019-03-04 14:34:11 -05:00
Kenneth Moreland
0aa99df394 Merge topic 'array-virtual-not-special'
db0f5c31b Add a Transfer object for ArrayHandleVirtual
99cb10b9a Fix warnings about override keyword
0ff83e94b Properly handle conditions when VirtualStorage is null
0571c6335 Add missing allocation methods to ArrayHandleVirtual
68b2e5e65 Add move constructors to ArrayHandle subclasses
0b32831af Make ArrayHandleVirtual conform with other ArrayHandle structure

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Robert Maynard <robert.maynard@kitware.com>
Merge-request: !1557
2019-03-04 14:13:19 -05:00
Kenneth Moreland
2d6a639485 Speed up the timer test
Previously, UnitTestTimer paused for 1 second each time it wanted to
test that the timer did (or didn't) record the time elapsing. This was
done 3 times per test and tested seperately on (currently) 5 devices.
The accumulated 15 seconds is not a whole lot, but it can add up when
coupled with the well over 300 other tests.

This change moves from the POSIX sleep function (which is limited to
increments of 1 second) to the updated C++ thread/chrono classes. The
amount of time to wait each time is now 0.25 seconds, which should speed
the test up by 4 times. The risk is that the shorter wait times can
throw off the results if the computer being run on is busy. If that is
the case, we can bump up the wait time (perhaps to 0.5 seconds).
2019-03-04 08:23:42 -07:00
Kenneth Moreland
db0f5c31b9 Add a Transfer object for ArrayHandleVirtual
Previously, ArrayHandleVirtual was using the default Transfer object.
This was problematic because it would copy/allocate things in the
execution environment independently from the array that it was wrapped
around. This caused several negative effects, particularly for CUDA
devices. First, if the data were already on the device (or the array is
implicit), a second copy of the data would be made. Second, the copy to
the device is likely less efficient. Third (and worst of all), the data
did not always get pulled back to the original array correctly.

This commit also contains instantiations of ArrayHandleVirtual and its
components for the most common types.
2019-03-01 15:50:16 -07:00
Kenneth Moreland
99cb10b9a9 Fix warnings about override keyword 2019-03-01 15:50:16 -07:00
Kenneth Moreland
0ff83e94bf Properly handle conditions when VirtualStorage is null
If an ArrayHandleVirtual is constructed without an underlying concrete
array handle, then the Storage<T, StorageTagVirtual> holds a
StorageVirtual pointer that is null. Generally, a null
ArrayHandleVirtual cannot do much, but its operations should still be
correct. There were a few places where the Storage would blindly try to
use its StorageVirtual pointer without checking it first. This adds some
conditions that should correct the behavior when StorageVirtual is null.
2019-03-01 15:50:16 -07:00
Kenneth Moreland
0571c6335d Add missing allocation methods to ArrayHandleVirtual 2019-03-01 15:50:16 -07:00
Kenneth Moreland
68b2e5e65c Add move constructors to ArrayHandle subclasses
There is a test to ensure that basic VTK-m classes have proper move
constructors that do not throw exceptions. Some of these are subclasses
of ArrayHandle. Add these move constructors to the
VTK_M_ARRAY_HANDLE_SUBCLASS macros so they get automatically added.
2019-03-01 15:50:16 -07:00
Kenneth Moreland
0b32831afd Make ArrayHandleVirtual conform with other ArrayHandle structure
Previously, ArrayHandleVirtual was defined as a specialization of
ArrayHandle with the virtual storage tag. This was because the storage
object was polymorphic and needed to be handled special. These changes
moved the existing storage definition to an internal class, and then
managed the pointer to that implementation class in a Storage object
that can be managed like any other storage object.

Also moved the implementation of StorageAny into the implementation of
the internal storage object.
2019-03-01 15:50:14 -07:00
Kenneth Moreland
03fc3d51ac Merge topic 'timer-init-runtime-device'
6797c6e33 Specify return type for GetTimerImpl
25f3432b1 Increase the conditions on which Timer is tested
4d9ce2488 Synchronize CUDA timer when stopping it
85265a9c8 Add const correctness to Timer
465508993 Allow resetting Timer with a new device
dd4a93952 Enable initializing Timer with a DeviceAdapterId

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Haocheng LIU <haocheng.liu@kitware.com>
Merge-request: !1562
2019-03-01 17:23:11 -05:00
Allison Vacanti
d1db4ef8b3 Clarify intent of TypeString and TypeName functions.
TypeName is used for logging, and is now TypeToString.

TypeString is used for serialization, and is now SerializableTypeString.
2019-03-01 11:47:53 -05:00
Kenneth Moreland
6797c6e336 Specify return type for GetTimerImpl
The internal function GetTimerImpl has a rather complex expression for
its return type. Prevously this was derived using declspec, but one of
the versions of Visual Studio barfed on that for some reason. So now
declare the return type explicitly.
2019-02-28 15:36:55 -07:00
Kenneth Moreland
25f3432b1a Increase the conditions on which Timer is tested
UnitTestTimer was changed to be initialized across all possible devices
and getting times across all possible devices. Also test all possible
ways to set the device in the Timer.
2019-02-28 15:08:32 -07:00
Kenneth Moreland
4d9ce24888 Synchronize CUDA timer when stopping it
Previously, when Stop was called on a Cuda timer, it would record a stop
event but it would not synchronize it at that time. Instead, the
synchronize was only called when GetElapsedTime was called. The problem
is that the time of the event is only marked when synchronize is called.
Thus, if the event completed before GetElapsedTime was called, it would
record the time from when the event acutally happened to the time when
GetElapsedTime was called as part of the elapsed time, which is
incorrect.

Fix the problem by synchronizing when Stop is called. Although this
makes the Timer more invasive, generally using the Timer can cause
synchronization to happen. This behavior is consistent with the Timer
implementation for other devices.
2019-02-28 15:08:32 -07:00
Kenneth Moreland
85265a9c84 Add const correctness to Timer
It should be possible to query a vtkm::cont::Timer without modifying it.
As such, its query functions (such as Stopped and GetElapsedTime) should
be const.
2019-02-28 15:08:16 -07:00
Robert Maynard
8114e9e627 VTK-m now doesn't use reserved C++ identifiers
Fixes #340
2019-02-28 15:08:08 -05:00
Kenneth Moreland
4655089934 Allow resetting Timer with a new device
Previously, in order to specify a device with the timer, it had to be
specified in the timer's construction or had to be specified every time
GetElapsedTime was called. The first method was inconvienient in the
case where there are multiple code paths to define the device and the
latter method was inconvienient because you would have to pass around a
device id.

Both these techniques still exist, but we have also added a new form of
Reset that allows you to change the device the timer is used on.
2019-02-27 15:38:32 -07:00
Kenneth Moreland
dd4a939525 Enable initializing Timer with a DeviceAdapterId
Previously, a vtkm::cont::Timer had to be initialized with either no
device or with a device adapter tag. However, this precluded
initializing the timer with a DeviceAdapterId, which made it difficult
to create a timer at runtime. Instead, just accept a DeviceAdapterId
(which all device adapter tags inherit from) and do runtime checks.
2019-02-27 15:36:46 -07:00
Kenneth Moreland
e9591621b3 Find threads library in external build
In certain circumstances (currently, when logging is enabled), VTK-m
libraries depend on the threading library. However, when the VTK-m
package was included from an external project, it did not automatically
find the threads package. This change makes the Threads library loaded
when the VTK-m package is found.
2019-02-27 14:03:10 -07:00
Kenneth Moreland
6aa99aec0f Add ability to remove degenerate cells in CleanGrid 2019-02-26 12:44:57 -07:00
Haocheng LIU
634f523d92 Merge benchmark executables into a device dependent shared library
VTK-m has been updated to replace old per device benchmark executables with a device
dependent shared library so that it's able to accept a device adapter at runtime through
the "--device=" argument.
2019-02-25 12:26:47 -05:00
Kenneth Moreland
1ca55ac319 Add specialized operators for ArrayPortalValueReference
The ArrayPortalValueReference is supposed to behave just like the value
it encapsulates and does so by automatically converting to the base type
when necessary. However, when it is possible to convert that to
something else, it is possible to get errors about ambiguous overloads.
To avoid these, add specialized versions of the operators to specify
which ones should be used.

Also consolidated the CUDA version of an ArrayPortalValueReference to the
standard one. The two implementations were equivalent and we would like
changes to apply to both.
2019-02-20 13:33:55 -07:00
Dave Pugmire
289e0f808e Move BoundingIntervalHierarchy to device-specific sources. 2019-02-19 10:49:31 -05:00
Dave Pugmire
314ebd3dc6 Merge branch 'master' of https://gitlab.kitware.com/vtk/vtk-m into gridEval 2019-02-18 14:38:37 -05:00
Robert Maynard
451bff6f14 vtkmdiy: Use the new mangled VTKM_DIY_ defines 2019-02-08 14:31:34 -05:00
Robert Maynard
74acc2a7bb vtkmdiy: Support only including the serialization headers of diy 2019-02-08 11:40:59 -05:00
Robert Maynard
ad98d818ce VTK-m now doesn't clobber external DIY installations
Fixes #334
2019-02-05 13:05:14 -05:00
Haocheng LIU
0696ae135e Merge topic 'asynchronize-timer'
415252c66 Introduce asynchronous and device independent timer

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Haocheng LIU <haocheng.liu@kitware.com>
Acked-by: Robert Maynard <robert.maynard@kitware.com>
Merge-request: !1530
2019-02-05 12:02:59 -05:00
Haocheng LIU
415252c662 Introduce asynchronous and device independent timer
The timer class now is asynchronous and device independent. it's using an
similiar API as vtkOpenGLRenderTimer with Start(), Stop(), Reset(), Ready(),
and GetElapsedTime() function. For convenience and backward compability, Each
Start() function call will call Reset() internally and each GetElapsedTime()
function call will call Stop() function if it hasn't been called yet for keeping
backward compatibility purpose.

Bascially it can be used in two modes:

* Create a Timer without any device info. vtkm::cont::Timer time;

  * It would enable timers for all enabled devices on the machine. Users can get a
specific elapsed time by passing a device id into the GetElapsedtime function.
If no device is provided, it would pick the maximum of all timer results - the
logic behind this decision is that if cuda is disabled, openmp, serial and tbb
roughly give the same results; if cuda is enabled it's safe to return the
maximum elapsed time since users are more interested in the device execution
time rather than the kernal launch time. The Ready function can be handy here
to query the status of the timer.

* Create a Timer with a device id. vtkm::cont::Timer time((vtkm::cont::DeviceAdapterTagCuda()));

  * It works as the old timer that times for a specific device id.
2019-02-05 12:01:56 -05:00
Robert Maynard
d0a70946b8 Simplify the DeviceAdapterRuntimeDetectorCuda to not do a kernel launch.
The kernel launch component of the runtime device adapter is fairly
pointless. If the hardware supports CUDA we should expect that
VTK-m has the correct kernel versions.

Plus in the original version if the CUDA device was being used
and the kernel launch returns cudaErrorDevicesUnavailable it
was never possible to restore CUDA support. Now what happens
is that the runtime tracker is marked as failed, but the
calling code can always go back and trying the device again.
2019-02-04 13:27:20 -05:00