Commit Graph

103 Commits

Author SHA1 Message Date
Li-Ta Lo
23a0166048 Add ArrayHandlePhiloxURBG
Add implementation and unit tests for ArrayHandlePhiloxURBG
2020-03-13 11:39:57 -06:00
Kenneth Moreland
5f44f3727c Add ability to attach token to standard ArrayHandle
Added new versions of PrepareFor* methods that take a token in addition
to the other arguments. The ArrayHandle attaches itself to the token and
will not allow operations that make the returned portal invalid until
the token goes out of scope.

Later the old versions will be deprecated.
2020-02-25 07:41:36 -07:00
Kenneth Moreland
a49fa83035 Add Token 2020-02-25 07:41:36 -07:00
Kenneth Moreland
92db376236 Convert uses of ListTagBase to List 2019-12-06 15:37:46 -07:00
nadavi
1fc542d068 add simple unit tests for Error 2019-09-11 16:12:18 -06:00
Allison Vacanti
885cce3914 Add ArrayPortalDecorator. 2019-09-11 12:50:59 -04:00
Kenneth Moreland
2b6e6da6ca Add ability to get VariantArrayHandle as an ArrayHandleMultiplexer 2019-09-09 08:19:15 -06:00
Allison Vacanti
63050f68fc MultiBlock renamed to PartitionedDataSet
The `MultiBlock` class has been renamed to `PartitionedDataSet`, and its API
has been refactored to refer to "partitions", rather than "blocks".
Additionally, the `AddBlocks` method has been changed to `AppendPartitions` to
more accurately reflect the operation performed. The associated
`AssignerMultiBlock` class has also been renamed to
`AssignerPartitionedDataSet`.

This change is motivated towards unifying VTK-m's data model with VTK. VTK has
started to move away from `vtkMultiBlockDataSet`, which is a hierarchical tree
of nested datasets, to `vtkPartitionedDataSet`, which is always a flat vector
of datasets used to assist geometry distribution in multi-process environments.
This simplifies traversal during processing and clarifies the intent of the
container: The component datasets are partitions for distribution, not
organizational groupings (e.g. materials).

Ref #405
2019-09-03 12:42:23 -04:00
Allison Vacanti
399f23963e Add ArrayGetValue[s] to address issue #355. 2019-08-22 11:16:16 -04:00
Kenneth Moreland
5e23853521 Create ArrayHandleMultiplexer 2019-07-22 08:36:28 -06:00
Mark Kim
6e1d3a84f0 First Extrude commit.
how did any of this work?

match other CellSet file layouts.

???

compile in CUDA.

unit tests.

also only serial.

make error message accurate

Well, this compiles and works now.

Did it ever?

use CellShapeTagGeneric

UnitTest matches previous changes.

whoops

Fix linking problems.

Need the same interface

as other ThreadIndices.

add filter test

okay, let's try duplicating CellSetStructure.

okay

inching...

change to wedge in CellSetListTag

Means changing these to support it.

switch back to wedge from generic

compiles and runs

remove ExtrudedType

need vtkm_worklet

vtkm_worklet needs to be included

fix segment count for wedge specialization

need to actually save the index

for the other constructor.

specialize on Explicit

clean up warning

angled brackets not quotes.

formatting
2019-06-20 22:17:24 -04:00
Robert Maynard
bcaf7d9beb ScopedRuntimeDeviceTracker have better controls of setting devices.
The ScopedRuntimeDeviceTracker now can force, enable, or disable
devices. Additionally the ScopedRuntimeDeviceTracker and the
RuntimeDeviceTracker handle the DeviceAdapterTagAny robustly
across all methods.
2019-05-21 15:32:10 -04:00
Robert Maynard
ff687016ee For VTK-m libs all includes of DeviceAdapterTagCuda happen from cuda files
It is very easy to cause ODR violations with DeviceAdapterTagCuda.
If you include that header from a C++ file and a CUDA file inside
the same program we an ODR violation. The reasons is that the C++
versions will say the tag is invalid, and the CUDA will say the
tag is valid.

The solution to this is that any compilation unit that includes
DeviceAdapterTagCuda from a version of VTK-m that has CUDA enabled
must be invoked by the cuda compiler.
2019-04-22 10:39:54 -04:00
nadavi
fbcea82e78 conslidate the license statement 2019-04-17 10:57:13 -06:00
Sujin Philip
f78e763be4 Add CellLocatorGeneral
A general purpose `CellLocator` that should work with any type of dataset.
Internally, it tries to chose one of the existing cell locators that would be
optimal for the input data.

Also removes `CellLocatorHelper`.
2019-04-03 10:22:05 -04:00
Sujin Philip
c6bead8388 Rename CellLocatorTwoLevelUniformGrid to CellLocatorUniformBins
Also make it a concrete sub-class of vtkm::cont::CellLocator
Fixes issue #251
2019-04-03 10:21:56 -04:00
Kenneth Moreland
b0303c96ed Allow Initialize to parse only some arguments
When a library requires reading some command line arguments through a
function like Initialize, it is typical that it will parse through
arguments it supports and then remove those arguments from argc and argv
so that the remaining arguments can be parsed by the calling program.
VTK-m's initialize did not do that, so add that functionality.
2019-03-26 12:04:18 -06:00
Sujin Philip
a09bb9eca3 Add a new test for CellSet API 2019-03-22 09:35:57 -04:00
Abhishek Yenpure
afd0409189 Merge topic 'code_sprint_locator_fixes'
9b56d41fe Fixing Rectilinear Grid Cell Locator
10e9d47dc Removing std::out print statement from test
34c7b57d8 Merge branch 'code_sprint_locator_fixes' of gitlab.kitware.com:ayenpure/vtk-m into code_sprint_locator_fixes
62ee1a2c8 Updates to the Cell Locators
7eb0de5b7 Merge branch 'code_sprint_locator_fixes' of gitlab.kitware.com:ayenpure/vtk-m into code_sprint_locator_fixes
866b0798d Resolving type warnings
c062f2e26 Merge branch 'master' of https://gitlab.kitware.com/vtk/vtk-m into code_sprint_locator_fixes
797c83891 Adding default constructor and removing wrong comment
...

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Kenneth Moreland <kmorel@sandia.gov>
Merge-request: !1395
2019-01-09 16:23:17 -05:00
ayenpure
62ee1a2c8a Updates to the Cell Locators
- Adding updates to uniform grid cell locator
  - adding OpenMP test, updating copyrights
- Adding rectilinear grid cell locator
  - adding unit tests for serial, tbb, OpenMP, and cuda
- Updating CMakeLists to honor the alphabetical ordering
2019-01-06 17:18:23 -08:00
Robert Maynard
3445047f9e Refactor vtkm::cont::ArrayHandleAny into vtkm::cont::ArrayHandleVirtual
ArrayHandleVirtual can automatically be constructed from any ArrayHandle.
In the cases where the input ArrayHandle doesn't derived from ArrayHandleVirtual,
it will automatically construct StorageAny to hold the array.
2018-12-27 15:42:03 -05:00
Robert Maynard
0a40c620ac Rename ArrayHandleVariant to VariantArrayHandle. 2018-12-27 14:35:56 -05:00
Robert Maynard
0c72555ee1 Update vtkm/cont/testing to work with ArrayHandleVariant 2018-12-27 14:35:56 -05:00
Robert Maynard
0da7830d9a Make sure important vtkm::cont classes have noexcept move ops.
This is important so they can be stored efficiently inside
containers such as std::vector that require strong move guarantees.
2018-12-10 10:33:18 -05:00
ayenpure
c062f2e26c Merge branch 'master' of https://gitlab.kitware.com/vtk/vtk-m into code_sprint_locator_fixes 2018-12-03 07:44:31 -08:00
Robert Maynard
db1b394336 Merge branch '291_logging' into 'master'
Add general logging support

See merge request vtk/vtk-m!1414
2018-10-04 09:36:47 -04:00
Allison Vacanti
bd337854ec Initial implementation of general logging.
Addresses #291.
2018-10-02 11:37:55 -04:00
Sujin Philip
365d3d3921 Implement DataSet Serialization 2018-09-25 13:58:39 -04:00
Sujin Philip
fd89dfc89b Add ArrayHandle Serialization 2018-09-25 13:58:39 -04:00
ayenpure
22ca8bce15 Fixing unit test 2018-08-30 10:19:00 -07:00
ayenpure
594d1934d4 Adding CellLocatorUniformGrid
- Adding a cell locator to locate points in a uniform grid
- Adding unit tests for the new cell locator
2018-08-29 19:30:07 -07:00
Allison Vacanti
716f393c32 Add DeviceAdapterId::GetName. 2018-08-28 14:14:49 -07:00
Utkarsh Ayachit
3211c1501c add support to run test with MPI.
`vtkm_unit_tests` now supports an MPI option that can be used to add
test that run with MPI. Adding `UnitTestFieldRangeGlobalCompute` to test
global ranges for fields.
2018-04-10 14:48:37 -04:00
Utkarsh Ayachit
f37e642563 Remove MultiBlock::GetGlobalRange API.
Removing MultiBlock::GetGlobalRange API to keep things consistent with
DataSet API. Instead, one should use `FieldRangeCompute` or
`FieldRangeGlobalCompute` as appropriate.
2018-04-05 17:16:10 -04:00
Utkarsh Ayachit
20a052f44e add FieldRangeCompute. 2018-04-05 17:16:10 -04:00
Robert Maynard
944bc3c0d6 Introduce vtkm::cont::ColorTable replacing vtkm::rendering::ColorTable
The new and improved vtkm::cont::ColorTable provides a more feature complete
color table implementation that is modeled after
vtkDiscretizableColorTransferFunction. This class therefore supports different
color spaces ( rgb, lab, hsv, diverging ) and supports execution across all
device adapters.
2018-03-28 16:11:23 -04:00
Sujin Philip
8f78aa739d Add CellLocator
Add a general cell locator that has an optimized path for uniform grid
datasets and uses CellLocatorTwoLevelUniformGrid for all other
dataset types.
2018-01-12 10:16:26 -05:00
Sujin Philip
950b12b1f2 Add ArrayHandleVirtualCoordinates 2018-01-09 17:23:41 -05:00
Utkarsh Ayachit
186e686968 Add ability to run tests with mpiexec.
Extends `vtkm_unit_tests` to support running tests with `mpiexec`.
Updates `UnitTestMultiBlock` to use mpi, if available.
2017-12-18 14:45:25 -05:00
Matt Larsen
eaebaea7cb adding a wrapper for device adapter algorithm 2017-11-29 07:44:37 -08:00
Sujin Philip
8c242cef91 Switch from faux to true virtuals 2017-11-06 15:25:29 -05:00
Li-Ta Lo
508882fa21 PointLocatorUniformGrid
Provide an accelerated neareast neighbor search of points in the
dataset using a one layer uniform grid.
2017-10-19 11:44:36 -06:00
Sujin Philip
41679cb5f9 Add a CellLocator
Implements a two-level uniform grid cell locator
2017-10-10 14:01:41 -04:00
Kenneth Moreland
65c7324ffe Create ArrayCopy method
This is a convenience method to do a deep copy of an array. This comes
up a lot, but can be a pain if you don't have a specific device adapter
on which to do the copy.
2017-09-25 16:28:44 -06:00
Kenneth Moreland
c3a3184d51 Update copyright for Sandia
Sandia National Laboratories recently changed management from the
Sandia Corporation to the National Technology & Engineering Solutions
of Sandia, LLC (NTESS). The copyright statements need to be updated
accordingly.
2017-09-20 15:33:44 -06:00
dongliangchu
a0cdad52e5 reviewed version 1 2017-08-30 10:30:29 -04:00
Sujin Philip
38700ffae3 Merge topic 'fix-cellsets'
4db096bf Update CellToPoint worklets
6ce8218d Implement CellToPoint for CellSetPermutation
46aa7451 Fix CellSetExplicit CellToPoint

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Kenneth Moreland <kmorel@sandia.gov>
Merge-request: !848
2017-08-07 14:20:10 -04:00
Allison Vacanti
1a09338e0c Merge topic '43-ArrayHandleExtractComponent'
84588c80 Add ArrayHandleExtractComponent.

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Sujin Philip <sujin.philip@kitware.com>
Merge-request: !853
2017-08-07 10:23:03 -04:00
Allison Vacanti
030ef57380 Add ArrayHandleSwizzle for reordering/removing components from a vec array.
This is tangentially related to #43.
2017-08-04 13:42:38 -04:00
Sujin Philip
6ce8218d09 Implement CellToPoint for CellSetPermutation 2017-08-02 15:19:06 -04:00