Commit Graph

797 Commits

Author SHA1 Message Date
Kenneth Moreland
b0b000263e Write out all test data sets in VTKDataSetWriter
Although convenient, one of the issues of creating data with
MakeTestDataSet is that it is hard to look at the data created. It is
often helpful to be able to bring in the data into something like
ParaView or VisIt to play with it. To enable that, write them all out as
part of UnitTestVTKDataSetWriter.
2019-08-29 16:48:53 -06:00
Allison Vacanti
884616788a Simplify and extend AtomicArray implementation.
- Use AtomicInterface to implement device-specific atomic operations.
- Remove DeviceAdapterAtomicArrayImplementations.
- Extend supported atomic types to include unsigned 32/64-bit ints.
- Add a static_assert to check that AtomicArray type is supported.
- Add documentation for AtomicArrayExecutionObject, including a CAS
  example.
- Add a `T Get(idx)` method to AtomicArrayExecutionObject that does
  an atomic load, and update existing CAS usage to use this instead
  of `Add(idx, 0)`.
2019-08-23 15:40:37 -04:00
Allison Vacanti
8bb9873389 Merge topic '355_fetch_single_value'
bfe357319 Add a missing header to StorageExtrude.
d3fbe535f Check the source array's active device in ArrayCopy.
399f23963 Add ArrayGetValue[s] to address issue #355.

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Kenneth Moreland <kmorel@sandia.gov>
Merge-request: !1790
2019-08-22 11:18:00 -04:00
Allison Vacanti
399f23963e Add ArrayGetValue[s] to address issue #355. 2019-08-22 11:16:16 -04:00
Robert Maynard
169480e4f0 Merge topic 'make_more_of_vtkm_vec_constexpr'
a529b90c7 vtkm::Vec const& operator[] is now constexpr

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Kenneth Moreland <kmorel@sandia.gov>
Merge-request: !1792
2019-08-22 08:35:51 -04:00
Robert Maynard
a529b90c73 vtkm::Vec const& operator[] is now constexpr
This allows for developers to do things such as the following
as constexpr's:
```cxx
constexpr vtkm::Id2 dims(16,16);
constexpr vtkm::Float64 dx = vtkm::Float64(4.0 * vtkm::Pi()) / vtkm::Float64(dims[0] - 1);
```
2019-08-22 08:34:25 -04:00
Kenneth Moreland
42f0e962bd Merge topic 'fix-implicit-functions'
bf96d921d Add extra braces around std::array initializers
9bbf4a5a6 Corrections and expanded testing of implicit functions

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Sujin Philip <sujin.philip@kitware.com>
Merge-request: !1776
2019-08-21 18:20:57 -04:00
Kenneth Moreland
20c758108c Add make_ArrayHandleSOA for std::vectors and C arrays 2019-08-20 12:09:57 -06:00
Kenneth Moreland
c508572460 Make SOA Portal test more type safe
I kept getting warnings from different compilers about type conversions
because I was making values by adding an index to them. Change how we
create and test values so that these type issues are less likely to come
up.
2019-08-20 12:09:56 -06:00
Kenneth Moreland
869d665806 Add ArrayHandleSOA
This ArrayHandle should behave just like the one with basic storage but
external arrays stored by component can be shallow-copied to them.
2019-08-20 12:09:54 -06:00
Kenneth Moreland
bf96d921de Add extra braces around std::array initializers
This appears to be a bug in older clang and gcc compilers where they
gave a warning asking for an extra unnecessary set of braces around the
initializer of std::array. See for example

https://bugs.llvm.org/show_bug.cgi?id=21629
https://gcc.gnu.org/bugzilla/show_bug.cgi?id=25137

I don't think newer compilers give this warning, but we still support
some older compilers it happens on, so we live with it.
2019-08-16 13:29:12 -06:00
Kenneth Moreland
9bbf4a5a61 Corrections and expanded testing of implicit functions
There were some errors in the ImplicitFunction classes. Fix the errors
found and expand TestingImplicitFunction.h to cover more cases.
2019-08-15 17:25:41 -06:00
Robert Maynard
031407443d Provide simplified way to construct point and cell fields 2019-08-15 11:03:41 -04:00
Abhishek Yenpure
321f1b6201 Merge topic 'particle_status_merge'
f1e9282b2 Adding changelog for the changes
39e278cf0 Fixing unreachable statement nvcc warning
2798c737a Fixing issues raised by Ken on Gitlab
a6df11732 Removing unnecessary commented code
aefc5faca Merge branch 'master' of https://gitlab.kitware.com/vtk/vtk-m into particle_status_merge
647afd159 Passing point to evaluate by reference
577694579 Adding binary search for Rectilinear locator
06d05196b Adding fast path to Uniform Grid Locator
...

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Kenneth Moreland <kmorel@sandia.gov>
Merge-request: !1756
2019-08-08 17:08:04 -04:00
nadavi
b929b6413e Adding Gradient tests for Implicit Functions 2019-08-08 10:03:27 -06:00
Allison Vacanti
ac5841805b Merge topic '358-declare-user-log-level'
ccb939fe0 added VTKM_DEFINE_USER_LOG_LEVEL as a convenience macro

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !1749
2019-08-08 10:27:21 -04:00
Abhishek Yenpure
aefc5faca6 Merge branch 'master' of https://gitlab.kitware.com/vtk/vtk-m into particle_status_merge 2019-08-07 13:06:34 -07:00
Abhishek Yenpure
5776945798 Adding binary search for Rectilinear locator 2019-08-07 12:33:52 -07:00
Nick Davis
ccb939fe0f added VTKM_DEFINE_USER_LOG_LEVEL as a convenience macro 2019-08-07 09:49:29 -06:00
Kenneth Moreland
fc65bc5336 Fix failure with UnitTestSerializationDataSet
For demonstration purposes, I added a vector field to one of the data
sets (the cow nose). However, the serialization test was not expecting a
field of that type and therefore had not compiled the case to serialize
that type of field, which caused a failure. Fixed the problem by
instructing the test to also consider the correct type of vector fields.
2019-08-07 09:14:03 -06:00
Kenneth Moreland
7a0a35b29f Add hello worklet example
This is a simple "hello world" example in VTK-m of implementing some
algorithm that runs in parallel.
2019-08-07 09:13:55 -06:00
Allison Vacanti
5db762ee71 Refactor topology mappings to clarify meaning.
The `From` and `To` nomenclature for topology mapping has been confusing for
both users and developers, especially at lower levels where the intention of
mapping attributes from one element to another is easily conflated with the
concept of mapping indices (which maps in the exact opposite direction).

These identifiers have been renamed to `VisitTopology` and `IncidentTopology`
to clarify the direction of the mapping. The order in which these template
parameters are specified for `WorkletMapTopology` have also been reversed,
since eventually there may be more than one `IncidentTopology`, and having
`IncidentTopology` at the end will allow us to replace it with a variadic
template parameter pack in the future.

Other implementation details supporting these worklets, include `Fetch` tags,
`Connectivity` classes, and methods on the various `CellSet` classes (such as
`PrepareForInput` have also reversed their template arguments. These will need
to be cautiously updated.

The convenience implementations of `WorkletMapTopology` have been renamed for
clarity as follows:

```
WorkletMapPointToCell --> WorkletVisitCellsWithPoints
WorkletMapCellToPoint --> WorkletVisitPointsWithCells
```

The `ControlSignature` tags have been renamed as follows:

```
FieldInTo --> FieldInVisit
FieldInFrom --> FieldInMap
FromCount --> IncidentElementCount
FromIndices --> IncidentElementIndices
```
2019-08-06 11:27:26 -04:00
Robert Maynard
2eeeafc1f5 Merge topic 'move_invoker_to_cont'
7e04b0511 Move Invoker into vtkm/cont

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Kenneth Moreland <kmorel@sandia.gov>
Merge-request: !1745
2019-08-01 12:36:00 -04:00
Robert Maynard
7e04b0511f Move Invoker into vtkm/cont
The Invoker is a control side object that handles the construction
of the relevant worklet dispatcher. Moving it to control makes it
obvious that it isn't an algorithm itself but a way to launch
worklets.
2019-08-01 12:34:27 -04:00
Allison Vacanti
112024dae2 Fix CUDA shfl usage.
There was a bug in the implementations of CountSetBits and
BitFieldToUnorderedSet.
2019-08-01 10:57:57 -04:00
Kenneth Moreland
0be50c119d Update VTK-m code to use new Vec aliases
Should make the code easier to read.
2019-07-31 12:55:40 -06:00
Kenneth Moreland
eaf87e4519 Remove special ArrayHandleMultiplexer template case
There was a special case for ArrayHandleMultiplexer where if you gave it
just one type it would treat that as a value type rather than an array
to support and instead provide a default list of types. However, GCC 4.8
is having trouble compiling the code to create the default list, the
semantics are confusing, and the more I think about it the less likely I
think we will need this functionality. So, just getting rid of that.
2019-07-30 14:48:35 -06:00
Kenneth Moreland
7b72e31dfb Fixes for CUDA 2019-07-22 08:36:28 -06:00
Kenneth Moreland
5e23853521 Create ArrayHandleMultiplexer 2019-07-22 08:36:28 -06:00
Kenneth Moreland
0e15a1116c Enable writing to ArrayHandleCast
Previously, `ArrayHandleCast` was considered a read-only array handle.
However, it is trivial to reverse the cast (now that `ArrayHandleTransform`
supports an inverse transform). So now you can write to a cast array
(assuming the underlying array is writable).

One trivial consequence of this change is that you can no longer make a
cast that cannot be reversed. For example, it was possible to cast a simple
scalar to a `Vec` even though it is not possible to convert a `Vec` to a
scalar value. This was of dubious correctness (it is more of a construction
than a cast) and is easy to recreate with `ArrayHandleTransform`.
2019-07-17 18:40:45 -06:00
Kenneth Moreland
6d37ce9453 Remove invalid PortalType
Several ArrayHandles (actuall Storage implementations) had a fake portal
type that only defined invalid value types and no Get/Set methods. The
idea was to quickly identify when using a read-only array for writing.
However, this was more trouble than it was worth as the compiler just
gives  an incomprehensible error and it is hard to track down the actual
value.

Now actually define some type even if it is never used.
2019-07-17 18:39:00 -06:00
Li-Ta Lo
2c6061d37f Merge topic 'locate-points-on-boundary'
461f87dbc Fix issues with PointLocatorUniformGrid not finding all points
e473cb4bb Fix PointLocatorUniformGrid for points on boundary

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Li-Ta Lo <ollie@lanl.gov>
Merge-request: !1720
2019-07-11 10:48:49 -04:00
Kenneth Moreland
e473cb4bbc Fix PointLocatorUniformGrid for points on boundary
When creating the search structures in PointLocatorUniformGrid, a point
outside the boundary would be given an invalid bin id. These points
could never be found. Generally, this is not a big deal for points
outside of the boundary, but it could be a problem for points on the
boundary. A point on the boundary could be taken as outside the
boundary. Since the boundary is chosen from limits of the points, some
will almost always be on the boundary.

Fix this problem by clamping all points to the nearest valid bin. This
could cause a problem if the user has selected a boundary excluding a
lot of points. All those points could be grouped to the same edge bins,
but that is probably not a great idea anyway.
2019-07-10 08:35:45 -06:00
Mark Kim
8dbb1c4de3 Merge branch 'master' of gitlab.kitware.com:m-kim/vtk-m into advdatamodel 2019-06-26 19:37:47 -04:00
Allison Vacanti
f370857c15 Add CountSetBits and Fill device algorithms. 2019-06-25 11:30:39 -04:00
Mark Kim
a5027d74d2 clean up warnings.
In clang and vc++
2019-06-24 22:10:32 -04:00
Mark Kim
a941f0aea3 pass arrayhandle to ArrayHandleExtrudeCoords
which passes directly to storage to avoid a copy.
2019-06-24 15:15:20 -04:00
Mark Kim
cffd3873fc Merge branch 'advdatamodel' 2019-06-20 22:20:44 -04:00
Mark Kim
6e1d3a84f0 First Extrude commit.
how did any of this work?

match other CellSet file layouts.

???

compile in CUDA.

unit tests.

also only serial.

make error message accurate

Well, this compiles and works now.

Did it ever?

use CellShapeTagGeneric

UnitTest matches previous changes.

whoops

Fix linking problems.

Need the same interface

as other ThreadIndices.

add filter test

okay, let's try duplicating CellSetStructure.

okay

inching...

change to wedge in CellSetListTag

Means changing these to support it.

switch back to wedge from generic

compiles and runs

remove ExtrudedType

need vtkm_worklet

vtkm_worklet needs to be included

fix segment count for wedge specialization

need to actually save the index

for the other constructor.

specialize on Explicit

clean up warning

angled brackets not quotes.

formatting
2019-06-20 22:17:24 -04:00
Kenneth Moreland
2e0f4dd376 Fix floating point error in test
The UnitTestCudaArrayHandleFancy was failing because it was
was calling TestValue in a worklet and comparing that to
a value that was generated by calling TestValue on the host.
Because these were called on different architecture, it is
possible that they will not be bit-wise exact. Add a little
bit of tolerance to the check to avoid false failures for
this reason.
2019-06-11 15:57:12 -06:00
Robert Maynard
095e288383 Merge topic 'better_scoped_rt_dt'
bcaf7d9be ScopedRuntimeDeviceTracker have better controls of setting devices.
4212d0c04 RuntimeDeviceInformation now says the AnyTag exists.
fa03dc664 ScopedRuntimeDeviceTracker requires a device to execute on when constructed.
4020f5198 RuntimeDeviceTracker can't be copied and is only accessible via reference.
e9482018e ScopedRuntimeDeviceTracker has the same API as RuntimeDeviceTracker

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Kenneth Moreland <kmorel@sandia.gov>
Merge-request: !1676
2019-05-24 16:45:22 -04:00
Robert Maynard
bcaf7d9beb ScopedRuntimeDeviceTracker have better controls of setting devices.
The ScopedRuntimeDeviceTracker now can force, enable, or disable
devices. Additionally the ScopedRuntimeDeviceTracker and the
RuntimeDeviceTracker handle the DeviceAdapterTagAny robustly
across all methods.
2019-05-21 15:32:10 -04:00
Robert Maynard
fa03dc664a ScopedRuntimeDeviceTracker requires a device to execute on when constructed.
To simplify using the ScopedRuntimeDeviceTracker it now takes the
device id you want to run on during construction.
2019-05-21 11:17:37 -04:00
Robert Maynard
4020f51988 RuntimeDeviceTracker can't be copied and is only accessible via reference.
As the RuntimeDeviceTracker is a per thread construct we now make
it explicit that you can only get a reference to the per-thread
version and can't copy it.
2019-05-20 11:43:05 -04:00
Robert Maynard
1b62901e96 Empty DynamicCellSet doesn't segfault on certain queries.
Fixes #370
2019-05-16 08:29:17 -04:00
Robert Maynard
e9482018ee ScopedRuntimeDeviceTracker has the same API as RuntimeDeviceTracker 2019-05-15 17:26:31 -04:00
Robert Maynard
674fe1fbf2 StealArray now returns the array and free function as a Pair.
This helps reduces bugs when the callers ask to steal arrays
without getting the free function, or ask for the free function
after stealing the array.
2019-05-01 09:42:57 -04:00
Robert Maynard
065d117838 Testing Device Adapter now uses ArrayHandle for all device transfers
The consistent API for control to execution memory transfers is
the ArrayHandle class. Previously the tests would verify memory
transfer by calling the ArrayManagerExecution class directly. This
is problematic as the class isn't used by ArrayHandle<T, StorageBasic>.
2019-04-30 13:50:08 -04:00
Robert Maynard
bd544754a4 Merge topic 'no_odr_violation_on_cuda_tag'
ff687016e For VTK-m libs all includes of DeviceAdapterTagCuda happen from cuda files

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Kenneth Moreland <kmorel@sandia.gov>
Merge-request: !1648
2019-04-23 14:40:38 -04:00
Robert Maynard
ff687016ee For VTK-m libs all includes of DeviceAdapterTagCuda happen from cuda files
It is very easy to cause ODR violations with DeviceAdapterTagCuda.
If you include that header from a C++ file and a CUDA file inside
the same program we an ODR violation. The reasons is that the C++
versions will say the tag is invalid, and the CUDA will say the
tag is valid.

The solution to this is that any compilation unit that includes
DeviceAdapterTagCuda from a version of VTK-m that has CUDA enabled
must be invoked by the cuda compiler.
2019-04-22 10:39:54 -04:00