vtk-m2/vtkm/worklet/contourtree_augmented/activegraph/CompactActiveEdgesTransferActiveEdges.h

215 lines
8.7 KiB
C++

//============================================================================
// Copyright (c) Kitware, Inc.
// All rights reserved.
// See LICENSE.txt for details.
//
// This software is distributed WITHOUT ANY WARRANTY; without even
// the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
// PURPOSE. See the above copyright notice for more information.
//============================================================================
// Copyright (c) 2018, The Regents of the University of California, through
// Lawrence Berkeley National Laboratory (subject to receipt of any required approvals
// from the U.S. Dept. of Energy). All rights reserved.
//
// Redistribution and use in source and binary forms, with or without modification,
// are permitted provided that the following conditions are met:
//
// (1) Redistributions of source code must retain the above copyright notice, this
// list of conditions and the following disclaimer.
//
// (2) Redistributions in binary form must reproduce the above copyright notice,
// this list of conditions and the following disclaimer in the documentation
// and/or other materials provided with the distribution.
//
// (3) Neither the name of the University of California, Lawrence Berkeley National
// Laboratory, U.S. Dept. of Energy nor the names of its contributors may be
// used to endorse or promote products derived from this software without
// specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
// ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
// WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
// IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT,
// INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
// BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
// DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
// OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED
// OF THE POSSIBILITY OF SUCH DAMAGE.
//
//=============================================================================
//
// This code is an extension of the algorithm presented in the paper:
// Parallel Peak Pruning for Scalable SMP Contour Tree Computation.
// Hamish Carr, Gunther Weber, Christopher Sewell, and James Ahrens.
// Proceedings of the IEEE Symposium on Large Data Analysis and Visualization
// (LDAV), October 2016, Baltimore, Maryland.
//
// The PPP2 algorithm and software were jointly developed by
// Hamish Carr (University of Leeds), Gunther H. Weber (LBNL), and
// Oliver Ruebel (LBNL)
//==============================================================================
#ifndef vtk_m_worklet_contourtree_augmented_active_graph_compact_active_edges_transfer_active_edges_h
#define vtk_m_worklet_contourtree_augmented_active_graph_compact_active_edges_transfer_active_edges_h
#include <vtkm/worklet/WorkletMapField.h>
#include <vtkm/worklet/contourtree_augmented/Types.h>
namespace vtkm
{
namespace worklet
{
namespace contourtree_augmented
{
namespace active_graph_inc
{
// Worklet for computing the sort indices from the sort order
class CompactActiveEdgesTransferActiveEdges : public vtkm::worklet::WorkletMapField
{
public:
typedef void ControlSignature(FieldIn activeVertices,
WholeArrayIn newPosition,
WholeArrayIn newOutdegree,
WholeArrayIn activeEdges,
WholeArrayOut newActiveEdges,
WholeArrayInOut edgeFar,
WholeArrayInOut firstEdge,
WholeArrayInOut outdegree,
WholeArrayInOut hyperarcs);
typedef void ExecutionSignature(_1, InputIndex, _2, _3, _4, _5, _6, _7, _8, _9);
using InputDomain = _1;
// Default Constructor
VTKM_EXEC_CONT
CompactActiveEdgesTransferActiveEdges() {}
template <typename InFieldPortalType, typename OutFieldPortalType, typename InOutFieldPortalType>
VTKM_EXEC void operator()(const vtkm::Id& vertexId,
const vtkm::Id activeVertex,
const InFieldPortalType& newPositionPortal,
const InFieldPortalType& newOutdegreePortal,
const InFieldPortalType& activeEdgesPortal,
const OutFieldPortalType& newActiveEdgesPortal,
const InOutFieldPortalType& edgeFarPortal,
const InOutFieldPortalType& firstEdgePortal,
const InOutFieldPortalType& outdegreePortal,
const InOutFieldPortalType& hyperarcsPortal) const
{
vtkm::Id edgeFirst = firstEdgePortal.Get(vertexId);
// retrieve the IS_SUPERNODE flag
vtkm::Id supernodeFlag = hyperarcsPortal.Get(vertexId) & IS_SUPERNODE;
// internal counter for # of edges
vtkm::Id whichEdge = newPositionPortal.Get(activeVertex);
// now reset the firstEdge variable for this vertex
firstEdgePortal.Set(vertexId, whichEdge);
// find the sentinel index
vtkm::Id edgeLast = edgeFirst + outdegreePortal.Get(vertexId);
// now loop through the vertex' edges
for (vtkm::Id edge = edgeFirst; edge < edgeLast; edge++)
{ // per edge
// retrieve the edge ID
vtkm::Id edgeId = activeEdgesPortal.Get(edge);
// retrieve the vertex ID for the far end & update for pruning
vtkm::Id farEnd = edgeFarPortal.Get(edgeId);
// grab its hyperarc to see what pruning did
vtkm::Id hyperFar = hyperarcsPortal.Get(farEnd);
// now get rid of the mask to find the real ID
farEnd = MaskedIndex(hyperFar);
// we want to ignore edges that lead back to this vertex
if (farEnd != vertexId)
{ // far end is different from the vertex
// reset the high end of the edge, copying downwards
edgeFarPortal.Set(edgeId, farEnd);
// and keep the edge around
newActiveEdgesPortal.Set(whichEdge++, edgeId);
// and reset the extremum for good measure
// preserving the supernode flag
hyperarcsPortal.Set(vertexId, farEnd | supernodeFlag);
} // far end is different from the vertex
} // per edge
// now reset the outdegree
outdegreePortal.Set(vertexId, newOutdegreePortal.Get(activeVertex));
// In serial this worklet implements the following operation
// for (indexType edge = 0; edge < edgeNear.size(); edge++)
/*
for (indexType activeVertex = 0; activeVertex < activeVertices.size(); activeVertex++)
{ // per vertex
// retrieve actual vertex ID & first edge
indexType vertexID = activeVertices[activeVertex];
indexType edgeFirst = firstEdge[vertexID];
// retrieve the IS_SUPERNODE flag
indexType supernodeFlag = hyperarcs[vertexID] & IS_SUPERNODE;
// internal counter for # of edges
indexType whichEdge = newPosition[activeVertex];
// now reset the firstEdge variable for this vertex
firstEdge[vertexID] = whichEdge;
// find the sentinel index
indexType edgeLast = edgeFirst + outdegree[vertexID];
// now loop through the vertex' edges
for (indexType edge = edgeFirst; edge < edgeLast; edge++)
{ // per edge
// retrieve the edge ID
indexType edgeID = activeEdges[edge];
// retrieve the vertex ID for the far end & update for pruning
indexType farEnd = edgeFar[edgeID];
// grab its hyperarc to see what pruning did
indexType hyperFar = hyperarcs[farEnd];
// now get rid of the mask to find the real ID
farEnd = MaskedIndex(hyperFar);
// we want to ignore edges that lead back to this vertex
if (farEnd != vertexID)
{ // far end is different from the vertex
// reset the high end of the edge, copying downwards
edgeFar[edgeID] = farEnd;
// and keep the edge around
newActiveEdges[whichEdge++] = edgeID;
// and reset the extremum for good measure
// preserving the supernode flag
hyperarcs[vertexID] = farEnd | supernodeFlag;
} // far end is different from the vertex
} // per edge
// now reset the outdegree
outdegree[vertexID] = newOutdegree[activeVertex];;
} // per vertex
*/
}
}; // InitializeEdgeFarFromActiveIndices
} // namespace active_graph_inc
} // namespace contourtree_augmented
} // namespace worklet
} // namespace vtkm
#endif