vtk-m2/vtkm/worklet/contourtree_distributed/tree_grafter/CopyNewHypernodesWorklet.h
2020-12-02 14:29:13 -08:00

162 lines
7.1 KiB
C++

//============================================================================
// Copyright (c) Kitware, Inc.
// All rights reserved.
// See LICENSE.txt for details.
//
// This software is distributed WITHOUT ANY WARRANTY; without even
// the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
// PURPOSE. See the above copyright notice for more information.
//============================================================================
// Copyright (c) 2018, The Regents of the University of California, through
// Lawrence Berkeley National Laboratory (subject to receipt of any required approvals
// from the U.S. Dept. of Energy). All rights reserved.
//
// Redistribution and use in source and binary forms, with or without modification,
// are permitted provided that the following conditions are met:
//
// (1) Redistributions of source code must retain the above copyright notice, this
// list of conditions and the following disclaimer.
//
// (2) Redistributions in binary form must reproduce the above copyright notice,
// this list of conditions and the following disclaimer in the documentation
// and/or other materials provided with the distribution.
//
// (3) Neither the name of the University of California, Lawrence Berkeley National
// Laboratory, U.S. Dept. of Energy nor the names of its contributors may be
// used to endorse or promote products derived from this software without
// specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
// ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
// WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
// IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT,
// INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
// BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
// DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
// OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED
// OF THE POSSIBILITY OF SUCH DAMAGE.
//
//=============================================================================
//
// This code is an extension of the algorithm presented in the paper:
// Parallel Peak Pruning for Scalable SMP Contour Tree Computation.
// Hamish Carr, Gunther Weber, Christopher Sewell, and James Ahrens.
// Proceedings of the IEEE Symposium on Large Data Analysis and Visualization
// (LDAV), October 2016, Baltimore, Maryland.
//
// The PPP2 algorithm and software were jointly developed by
// Hamish Carr (University of Leeds), Gunther H. Weber (LBNL), and
// Oliver Ruebel (LBNL)
//==============================================================================
#ifndef vtk_m_worklet_contourtree_distributed_tree_grafter_copy_new_hypernodes_worklet_h
#define vtk_m_worklet_contourtree_distributed_tree_grafter_copy_new_hypernodes_worklet_h
#include <vtkm/worklet/WorkletMapField.h>
#include <vtkm/worklet/contourtree_augmented/Types.h>
namespace vtkm
{
namespace worklet
{
namespace contourtree_distributed
{
namespace tree_grafter
{
// Worklet implementing the inner parallel loop to collaps the regular chains in TreeGrafter.CollapseRegularChains
class CopyNewHypernodesWorklet : public vtkm::worklet::WorkletMapField
{
public:
using ControlSignature = void(FieldIn newHypernodes, // input iteration index.
WholeArrayIn hierarchicalSuperId, // input
WholeArrayIn hierarchicalHyperarc, // input
WholeArrayOut hierarchicalTreeHypernodes, // output
WholeArrayOut hierarchicalTreeHyperarcs // output
);
using ExecutionSignature = void(InputIndex, _1, _2, _3, _4, _5);
using InputDomain = _1;
// Default Constructor
VTKM_EXEC_CONT
CopyNewHypernodesWorklet(vtkm::Id numOldHypernodes)
: NumOldHypernodes(numOldHypernodes)
{
}
template <typename InFieldPortalType, typename OutFieldPortalType>
VTKM_EXEC void operator()(
const vtkm::Id& newHypernode, // position in newHypernodes arrays
const vtkm::Id&
oldSupernodeId, // old hypernode ID & super ID, i.e., newHypernodes[newHypernode]
const InFieldPortalType& hierarchicalSuperIdPortal, // input
const InFieldPortalType& hierarchicalHyperarcPortal, // input
const OutFieldPortalType& hierarchicalTreeHypernodesPortal, // output
const OutFieldPortalType& hierarchicalTreeHyperarcsPortal // output
) const
{ // operator ()
// per new hypernode
// retrieve the old hypernode ID & super ID (DONE as part of the worklet invocation)
// convert into new IDs
vtkm::Id newHypernodeId = this->NumOldHypernodes + newHypernode;
vtkm::Id newHypernodeSuperId = hierarchicalSuperIdPortal.Get(oldSupernodeId);
// store the new hypernode ID
hierarchicalTreeHypernodesPortal.Set(newHypernodeId, newHypernodeSuperId);
// retrieve the hyperarc and convert, carrying masking bits
vtkm::Id newHyperarcOldSuperId = hierarchicalHyperarcPortal.Get(oldSupernodeId);
vtkm::Id isAscendingHyperarc =
vtkm::worklet::contourtree_augmented::IsAscending(newHyperarcOldSuperId)
? vtkm::worklet::contourtree_augmented::IS_ASCENDING
: 0x0;
newHyperarcOldSuperId =
vtkm::worklet::contourtree_augmented::MaskedIndex(newHyperarcOldSuperId);
vtkm::Id newHyperarcNewSuperId =
hierarchicalSuperIdPortal.Get(newHyperarcOldSuperId) | isAscendingHyperarc;
// and store it
hierarchicalTreeHyperarcsPortal.Set(newHypernodeId, newHyperarcNewSuperId);
// In serial this worklet implements the following operation
/*
// B. Copy in the hypernodes & hyperarcs
for (indexType newHypernode = 0; newHypernode < nNewHypernodes; newHypernode++)
{ // per new hypernode
// retrieve the old hypernode ID & super ID
indexType oldSupernodeID = newHypernodes[newHypernode];
// convert into new IDs
indexType newHypernodeID = nOldHypernodes + newHypernode;
indexType newHypernodeSuperID = hierarchicalSuperID[oldSupernodeID];
// store the new hypernode ID
hierarchicalTree.hypernodes[newHypernodeID] = newHypernodeSuperID;
// retrieve the hyperarc and convert, carrying masking bits
indexType newHyperarcOldSuperID = hierarchicalHyperarc[oldSupernodeID];
indexType isAscendingHyperarc = isAscending(newHyperarcOldSuperID) ? IS_ASCENDING : 0x0;
newHyperarcOldSuperID = maskedIndex(newHyperarcOldSuperID);
indexType newHyperarcNewSuperID = hierarchicalSuperID[newHyperarcOldSuperID] | isAscendingHyperarc;
// and store it
hierarchicalTree.hyperarcs[newHypernodeID] = newHyperarcNewSuperID;
} // per new hypernode
*/
} // operator ()
private:
vtkm::Id NumOldHypernodes;
}; // CopyNewHypernodes
} // namespace tree_grafter
} // namespace contourtree_distributed
} // namespace worklet
} // namespace vtkm
#endif