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mni_autoreg: init at 0.99.70

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Ben Darwin 2017-09-25 11:34:39 -04:00
parent 61864898f3
commit bd460f54a3
2 changed files with 38 additions and 0 deletions
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34
pkgs/applications/science/biology/mni_autoreg/default.nix Normal file
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@ -0,0 +1,34 @@
{ stdenv, fetchgit, cmake, makeWrapper, perl, GetoptTabular, MNI-Perllib, libminc }:
stdenv.mkDerivation rec {
pname = "mni_autoreg";
name = "${pname}-0.99.70";
src = fetchgit {
url = "https://github.com/BIC-MNI/${pname}.git";
rev = "a4367b82012fe3b40e794fc1eb6c3c86e86148bf";
sha256 = "1j5vk7hf03y38fwb5klfppk3g4d2hx1fg3ikph2708pnssmim2qr";
};
nativeBuildInputs = [ cmake makeWrapper ];
buildInputs = [ libminc ];
propagatedBuildInputs = [ perl GetoptTabular MNI-Perllib ];
cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" "-DBUILD_TESTING=FALSE" ];
# testing broken: './minc_wrapper: Permission denied' from Testing/ellipse0.mnc
postFixup = ''
for prog in autocrop mritoself mritotal xfmtool; do
echo $out/bin/$prog
wrapProgram $out/bin/$prog --prefix PERL5LIB : $PERL5LIB;
done
'';
meta = with stdenv.lib; {
homepage = https://github.com/BIC-MNI/mni_autoreg;
description = "Tools for automated registration using the MINC image format";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
};
}

4
pkgs/top-level/all-packages.nix
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@ -19765,6 +19765,10 @@ with pkgs;
inherit (perlPackages) TextFormat;
};
mni_autoreg = callPackage ../applications/science/biology/mni_autoreg {
inherit (perlPackages) GetoptTabular MNI-Perllib;
};
ncbi_tools = callPackage ../applications/science/biology/ncbi-tools { };
paml = callPackage ../applications/science/biology/paml { };