Peter Simons
bb42c215e2
R: improve support for CRAN and Bioconductor package sets
...
- Update the instructions for re-generating each of the package set files.
- Provide test-evaluation.nix expression to verify that the package sets evaluates.
- Update list of known broken packages.
2015-06-17 23:19:56 +02:00
Jeffrey David Johnson
93a742fd28
R: add support for Bioconductor packages
2015-06-17 23:19:56 +02:00
Peter Simons
362e60a5dc
r-modules: fix rapportools
2015-06-16 12:48:50 +02:00
Peter Simons
21c18c4f0a
r-modules: fix rapport
2015-06-16 12:48:50 +02:00
Peter Simons
ccd6988b3d
r-modules: fix xml2
2015-06-16 12:48:50 +02:00
Peter Simons
8ac6350ce7
r-modules: fix pander
2015-06-16 12:48:50 +02:00
Peter Simons
9fc5317055
r-modules: fix curl
2015-06-16 12:48:50 +02:00
Peter Simons
d4c810cccd
r-modules: disable broken packages to avoid Hydra evaluation errors
2015-06-16 12:48:49 +02:00
Peter Simons
b667cb6163
Merge pull request #8298 from abbradar/r-updates
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R updates
2015-06-15 20:31:57 +02:00
Nikolay Amiantov
29779ae642
R: regenerate CRAN packages
2015-06-12 03:44:39 +03:00
Nikolay Amiantov
9bb5e7edbd
generate-cran-packages: make executable
2015-06-12 03:44:38 +03:00
Thomas Tuegel
8245caedf1
rPackages.SamplerCompare: build with openblas
2015-06-09 11:47:40 -05:00
Thomas Tuegel
58754130cc
rPackages.slfm: build with openblas
2015-06-09 11:47:26 -05:00
Thomas Tuegel
77aa1c990e
rPackages.Mposterior: build with openblas
2015-06-09 11:47:12 -05:00
Thomas Tuegel
b120a737fd
rPackages.BayesLogit: build with openblas
2015-06-09 11:43:00 -05:00
Peter Simons
949746f9f5
r-modules: disable broken builds
2015-05-15 13:48:38 +02:00
Peter Simons
278df52729
r-xml2: fix build
2015-05-15 13:47:27 +02:00
Peter Simons
aaa9f837a9
r-modules: fix Hydra evaluation errors
2015-05-13 11:31:39 +02:00
Michel Kuhlmann
aabee7eb46
r-modules: regenerate 2015-05-11T14:48:00+0100
2015-05-12 07:47:41 +02:00
Peter Simons
e313cd711e
r-modules: disable broken builds on Hydra
2015-04-20 17:38:46 +02:00
Peter Simons
0b088ce581
r-modules: revert "disable builds that depend on broken gdal library"
...
This reverts commit 9e9b5e6e6949ee83701f42b37c06641d6be25adb. gdal has
been fixed in 1645795c53807a83561479eebf25bb1adce003ce.
2015-04-19 17:52:50 +02:00
Peter Simons
9e9b5e6e69
r-modules: disable builds that depend on broken gdal library
2015-04-17 20:02:46 +02:00
Michel Kuhlmann
cc5f5f0fd3
r-modules: update from CRAN state at 2015-04-16T11:23:00+0100
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Closes https://github.com/NixOS/nixpkgs/pull/7411 .
2015-04-17 15:38:12 +02:00
William A. Kennington III
758319f67f
One more mysql fix
2015-04-01 16:52:38 -07:00
Peter Simons
aed1895643
r-modules: remedy remaining Hydra failures
2015-03-29 00:17:55 +01:00
Peter Simons
f6886c62dc
r-modules: disable broken builds on Hydra
2015-03-28 10:36:54 +01:00
Michel Kuhlmann
c96bc1e507
r-modules: fixing rggobi by adding initial expression for ggobi
2015-03-26 12:20:07 +01:00
Peter Simons
5238bfb73f
r-modules: fix evaluation errors
2015-03-21 23:33:50 +01:00
Peter Simons
701251e435
r-modules: update from CRAN state at 2015-03-21T20:01:16+0100)
2015-03-21 23:33:50 +01:00
Joachim Fasting
0e52c562b5
RAppArmor: use AppArmor 2.9
2015-03-19 14:14:28 +01:00
Peter Simons
d388855731
r-SID: mark broken
2015-03-09 21:14:00 +01:00
Peter Simons
e8b33876af
r-Cell: drop obsolete package
2015-03-09 16:43:37 +01:00
Peter Simons
a591dbac3b
r-modules: update from CRAN state at 2015-03-09T16:32:24+0100
2015-03-09 16:37:05 +01:00
Peter Simons
eaf728c3d3
r-modules: fix git2r, TAQMNGR, and WhopGenome
2015-03-06 11:21:21 +01:00
Peter Simons
030bd26af3
r-modules: mark daff and rjade broken
2015-03-04 12:51:43 +01:00
Adam Vogt
2397f96d92
CRAN MASS_7.3-39 was uploaded twice, so use the newer checksum
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The two dates are:
Packaged: 2015-02-20 08:29:38 UTC; ripley
Packaged: 2015-02-24 10:34:20 UTC; ripley
There were with changes to tests/Examples/MASS-Ex.Rout.save,
but the rest of the code seems unaffected.
2015-02-26 19:16:55 -05:00
Adam Vogt
5adab4cbc9
remove some packages marked broken for cran-packages.nix
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those packages were removed from cran (and cran-packages.nix)
2015-02-26 16:17:15 -05:00
Adam Vogt
f8d0a412d6
update cran packages
2015-02-25 17:50:42 -05:00
Adam Vogt
8365753a43
let generate-cran-packages.R read checksums from cran-packages.nix
...
this lets "Rscript generate-cran-packages.R > cran-packages.nix"
complete much quicker, because we only have to download packages
with new versions.
2015-02-25 17:43:43 -05:00
Peter Simons
80101c8329
Disable some broken R packages.
2015-02-22 18:22:35 +01:00
Peter Simons
7afe039842
pkgs/development/r-modules: fix evaluation errors
2015-02-20 15:08:18 +01:00
Nikolay Amiantov
8450ff3ab8
rPackages: fix broken packages
2015-02-19 23:53:36 +03:00
Nikolay Amiantov
3e6531c174
rPackages: add packagesWithRDepends
2015-02-19 23:51:24 +03:00
Nikolay Amiantov
88ab59eb73
rPackages: nicer override* functions
2015-02-19 23:50:42 +03:00
Nikolay Amiantov
0f9c0348af
rPackages: remove Xvfb where it's not needed
2015-02-19 23:49:41 +03:00
Nikolay Amiantov
6c2a607112
R: update archive url
2015-02-18 15:41:46 +03:00
Nikolay Amiantov
75ce44a95c
r-modules: regenerate
2015-02-18 15:41:46 +03:00
Peter Simons
6b261cc4d4
rPackages: allow users to override the version of R to be used for building
2015-01-27 14:04:54 +01:00
Peter Simons
282fd58c85
r-curl: help the package find curl's headers
2015-01-26 10:23:34 +01:00
Peter Simons
7fa0fa6450
r-modules: fix evaluation and minor cleanups
2015-01-22 11:39:00 +01:00
