Asko Soukka
a225a650bf
R: fix Darwin build
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Merged manually from https://github.com/NixOS/nixpkgs/pull/10623 .
2016-01-06 22:20:40 +01:00
Michel Kuhlmann
26f80d7a6f
r-modules: update list of broken packages
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Closes https://github.com/NixOS/nixpkgs/pull/12181 .
2016-01-06 21:50:36 +01:00
Michel Kuhlmann
4c3d76d3c8
r-modules: regenerate CRAN packages
2016-01-04 09:19:24 +01:00
Peter Simons
3a8112f7da
r-modules: prefer gsl 1.x since 2.x is unsupported by r-gsl-1.9.x
2015-12-29 21:22:59 +01:00
Peter Simons
de02462a36
r-modules: update list of broken packages
2015-11-25 11:39:28 +01:00
Nikolay Amiantov
bd4297dc4d
r-modules: regenerate CRAN, BIOC and IRKernel
2015-11-25 11:39:28 +01:00
Nikolay Amiantov
287f99bada
r-modules: use HTTPS, allow passing args from generated set, use MRAN
2015-11-25 11:39:28 +01:00
Peter Simons
fa5de61315
r-tikzDevice: update to new texlive
2015-11-24 17:30:28 +01:00
Peter Simons
d7e6a46770
r-modules: update list of broken builds to avoid Hydra errors
2015-11-18 15:23:46 +01:00
Michel Kuhlmann
cab1f3de5e
R: regenerate CRAN packages
2015-11-17 14:34:27 +01:00
Asko Soukka
d8e3a981c5
r-modules: init IRkernel packages
2015-10-30 03:48:23 +02:00
Michel Kuhlmann
ec8f31d26c
R: fix some modules with configure-shebang-error
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- xml2: fix configure script
- rversion, devtools: mark as unbroken
dependency R-curl was fixed in 513e31185bb15a8c2b52149b1f1c2b3fe1740745
2015-10-12 10:02:48 +02:00
Peter Simons
7c516259e7
r-modules: update list of broken packages
2015-10-05 14:15:41 +02:00
Karn Kallio
94629aa57d
R: regenerate CRAN and BIOC packages
2015-10-04 20:06:49 +02:00
Nikolay Amiantov
513e31185b
R-curl: fix configure script
2015-10-04 20:06:49 +02:00
Vladimír Čunát
88c9f8b574
xlibs: replace occurrences by xorg
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This seems to have been confusing people, using both xlibs and xorg, etc.
- Avoided renaming local (and different) xlibs binding in gcc*.
- Fixed cases where both xorg and xlibs were used.
Hopefully everything still works as before.
2015-09-15 12:54:34 +02:00
Vladimír Čunát
21e3ff658a
x11: replace its usage by xlibsWrapper directly
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Scilab note: the parameters already had pointed to nonexistent dirs
before this set of refactoring. But that config wasn't even used by
default.
2015-09-15 12:08:24 +02:00
Bjørn Forsman
22321f2e58
cudatoolkit: don't move $out/include to $out/usr_include
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This effectively reverts 86c283824f76d849acbe6
("If cuda headers are presented to nix [...]") and all the following
workarounds that was added due to that commit.
As far as I can tell[1] this hack isn't needed anymore. And moving
includes to $out/usr_include causes pain for cudatoolkit users, so
better get rid of it.
In patches that did more than the $out/usr_include workaround, I only
changed the line back to $out/include instead of re-generating the
patches and fully removing the changed line.
[1]: I build tested blender and caffe, and temporarily added
recurseIntoAttrs to rPackages and haskellPackages so that nox-review
could get proper coverage. However, many of the packages do not build
even before this patch. I also built CUDA samples with cudatoolkit7
that ran fine.
2015-09-10 10:35:40 +02:00
Peter Simons
5d1bcf2f4e
R: fix Hydra build & evaluation errors
2015-08-06 20:13:50 +02:00
Peter Simons
36fc26c0fc
R: regenerate CRAN and BIOC packages
2015-08-06 20:13:50 +02:00
Peter Simons
7a0fa8f898
r-modules: fix evaluation errors
2015-08-06 20:13:49 +02:00
Michel Kuhlmann
18cff91fb7
R: regenerate CRAN and BIOC packages
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Closes https://github.com/NixOS/nixpkgs/pull/9037 .
2015-08-06 20:13:49 +02:00
Peter Simons
73ad191afb
r-modules: fix Hydra evaluation errors
2015-08-06 20:13:49 +02:00
Nikolay Amiantov
e3461ce259
rPackages.stringi: add ICU data tables
2015-07-28 12:33:29 +03:00
Peter Simons
b59685de83
r-stringi: fix build
2015-07-12 02:38:42 +02:00
Michel Kuhlmann
bb2b683e63
R: regenerate CRAN and BIOC packages
2015-07-09 14:52:17 +02:00
Peter Simons
bb42c215e2
R: improve support for CRAN and Bioconductor package sets
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- Update the instructions for re-generating each of the package set files.
- Provide test-evaluation.nix expression to verify that the package sets evaluates.
- Update list of known broken packages.
2015-06-17 23:19:56 +02:00
Jeffrey David Johnson
93a742fd28
R: add support for Bioconductor packages
2015-06-17 23:19:56 +02:00
Peter Simons
362e60a5dc
r-modules: fix rapportools
2015-06-16 12:48:50 +02:00
Peter Simons
21c18c4f0a
r-modules: fix rapport
2015-06-16 12:48:50 +02:00
Peter Simons
ccd6988b3d
r-modules: fix xml2
2015-06-16 12:48:50 +02:00
Peter Simons
8ac6350ce7
r-modules: fix pander
2015-06-16 12:48:50 +02:00
Peter Simons
9fc5317055
r-modules: fix curl
2015-06-16 12:48:50 +02:00
Peter Simons
d4c810cccd
r-modules: disable broken packages to avoid Hydra evaluation errors
2015-06-16 12:48:49 +02:00
Peter Simons
b667cb6163
Merge pull request #8298 from abbradar/r-updates
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R updates
2015-06-15 20:31:57 +02:00
Nikolay Amiantov
29779ae642
R: regenerate CRAN packages
2015-06-12 03:44:39 +03:00
Nikolay Amiantov
9bb5e7edbd
generate-cran-packages: make executable
2015-06-12 03:44:38 +03:00
Thomas Tuegel
8245caedf1
rPackages.SamplerCompare: build with openblas
2015-06-09 11:47:40 -05:00
Thomas Tuegel
58754130cc
rPackages.slfm: build with openblas
2015-06-09 11:47:26 -05:00
Thomas Tuegel
77aa1c990e
rPackages.Mposterior: build with openblas
2015-06-09 11:47:12 -05:00
Thomas Tuegel
b120a737fd
rPackages.BayesLogit: build with openblas
2015-06-09 11:43:00 -05:00
Peter Simons
949746f9f5
r-modules: disable broken builds
2015-05-15 13:48:38 +02:00
Peter Simons
278df52729
r-xml2: fix build
2015-05-15 13:47:27 +02:00
Peter Simons
aaa9f837a9
r-modules: fix Hydra evaluation errors
2015-05-13 11:31:39 +02:00
Michel Kuhlmann
aabee7eb46
r-modules: regenerate 2015-05-11T14:48:00+0100
2015-05-12 07:47:41 +02:00
Peter Simons
e313cd711e
r-modules: disable broken builds on Hydra
2015-04-20 17:38:46 +02:00
Peter Simons
0b088ce581
r-modules: revert "disable builds that depend on broken gdal library"
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This reverts commit 9e9b5e6e6949ee83701f42b37c06641d6be25adb. gdal has
been fixed in 1645795c53807a83561479eebf25bb1adce003ce.
2015-04-19 17:52:50 +02:00
Peter Simons
9e9b5e6e69
r-modules: disable builds that depend on broken gdal library
2015-04-17 20:02:46 +02:00
Michel Kuhlmann
cc5f5f0fd3
r-modules: update from CRAN state at 2015-04-16T11:23:00+0100
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Closes https://github.com/NixOS/nixpkgs/pull/7411 .
2015-04-17 15:38:12 +02:00
William A. Kennington III
758319f67f
One more mysql fix
2015-04-01 16:52:38 -07:00
