| .. |
|
ants
|
ants: use itk 4.x
|
2019-09-13 11:54:21 +02:00 |
|
aragorn
|
aragorn: init at 1.2.38 (#58354)
|
2019-04-29 07:18:03 -04:00 |
|
bayescan
|
bayescan: init at 2.1 (#68191)
|
2020-01-09 12:38:53 -05:00 |
|
bcftools
|
bcftools: 1.9 -> 1.10.2
|
2019-12-22 20:00:29 -08:00 |
|
bedtools
|
bedtools: 2.29.1 -> 2.29.2
|
2019-12-18 10:39:25 +11:00 |
|
bftools
|
bftools: 5.9.2 -> 6.3.0
|
2019-12-06 02:11:00 -08:00 |
|
blast
|
blast: init at 2.10.0 (#61430)
|
2020-01-07 20:14:18 +01:00 |
|
bowtie2
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
bwa
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
cd-hit
|
cd-hit: init at 4.8.1
|
2019-06-13 14:35:13 +02:00 |
|
clustal-omega
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
cmtk
|
treewide: remove redundant rec
|
2019-08-28 11:07:32 +00:00 |
|
conglomerate
|
lib.makePerlPath -> perlPackages.makePerlPath
|
2018-12-15 03:50:31 +00:00 |
|
dcm2niix
|
dcm2niix: 1.0.20190410 -> 1.0.20190902
|
2019-10-22 16:31:19 -07:00 |
|
deeptools
|
deeptools: 3.3.1 -> 3.4.1
|
2020-03-30 21:47:32 -07:00 |
|
delly
|
delly: 0.8.1 -> 0.8.2
|
2020-02-11 19:21:59 +11:00 |
|
diamond
|
treewide: remove redundant rec
|
2019-08-28 11:07:32 +00:00 |
|
ecopcr
|
ecopcr: init at 0.8.0
|
2017-02-06 16:01:08 +01:00 |
|
eggnog-mapper
|
treewide: remove redundant quotes
|
2019-09-08 23:38:31 +00:00 |
|
emboss
|
emboss: fix build
|
2017-03-13 13:15:51 +01:00 |
|
est-sfs
|
est-sfs: init at 2.03
|
2019-07-16 13:55:59 +02:00 |
|
exonerate
|
exonerate: init at 2.4.0
|
2019-04-19 14:58:57 +02:00 |
|
EZminc
|
EZminc: 2017-08-29 -> 2019-07-25; mark unbroken
|
2019-10-26 09:55:30 -07:00 |
|
freebayes
|
freebayes: 2017-08-23 -> 1.3.1 (2019-06-03)
|
2019-11-20 09:10:31 -08:00 |
|
hisat2
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
hmmer
|
hmmer: 3.2.1 -> 3.3
|
2019-11-27 18:40:23 -08:00 |
|
igv
|
maintainer: mimadrid: update github username and personal data
|
2019-09-14 12:15:46 +02:00 |
|
inormalize
|
lib.makePerlPath -> perlPackages.makePerlPath
|
2018-12-15 03:50:31 +00:00 |
|
itsx
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
iv
|
iv: only use patchelf on linux
|
2019-06-05 23:42:58 -04:00 |
|
kallisto
|
kallisto: 0.46.1 -> 0.46.2
|
2020-02-15 22:39:58 +01:00 |
|
kssd
|
kssd: init at 1.0
|
2019-12-08 16:48:59 +01:00 |
|
last
|
last: 1047 -> 1060
|
2020-03-27 04:12:41 +00:00 |
|
macse
|
macse: init at 2.03
|
2019-09-24 08:24:07 +02:00 |
|
manta
|
manta: init 1.6.0
|
2020-01-24 02:02:19 -08:00 |
|
megahit
|
megahit: 1.1.4 -> 1.2.9
|
2019-11-02 15:53:57 +01:00 |
|
messer-slim
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
migrate
|
migrate: init at 3.7.2
|
2019-04-05 09:01:36 +02:00 |
|
minc-tools
|
minc_tools: enable building conversion tools
|
2020-02-10 19:53:25 +01:00 |
|
minc-widgets
|
lib.makePerlPath -> perlPackages.makePerlPath
|
2018-12-15 03:50:31 +00:00 |
|
minia
|
minia: init at 3.2.1
|
2019-12-20 11:27:04 +11:00 |
|
minimap2
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
mni_autoreg
|
treewide: remove BUILD_TESTING flag
|
2019-03-11 10:11:28 -04:00 |
|
mosdepth
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
mrbayes
|
|
|
|
mrtrix
|
mrtrix: init at 3.0_RC3_latest
|
2020-02-16 22:25:25 -05:00 |
|
muscle
|
muscle: init at 3.8.31
|
2018-01-28 12:32:46 +01:00 |
|
N3
|
lib.makePerlPath -> perlPackages.makePerlPath
|
2018-12-15 03:50:31 +00:00 |
|
ncbi-tools
|
treewide: Make configureFlags lists
|
2018-08-03 17:06:03 -04:00 |
|
neuron
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
niftyreg
|
niftyreg: fix build with gcc9
|
2019-11-03 14:43:37 +01:00 |
|
niftyseg
|
nifticlib and niftseg: change platform from linux to unix since these build on OSX
|
2019-11-14 21:25:10 -05:00 |
|
octopus
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
paml
|
paml: 4.9i -> 4.9j
|
2019-12-01 18:43:58 +01:00 |
|
picard-tools
|
picard-tools: 2.22.0 -> 2.22.2
|
2020-04-01 17:29:55 +00:00 |
|
platypus
|
treewide: remove redundant rec
|
2019-08-28 11:07:32 +00:00 |
|
plink
|
pkgs: refactor needless quoting of homepage meta attribute (#27809)
|
2017-08-01 22:03:30 +02:00 |
|
plink-ng
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
poretools
|
treewide: fix redirected urls
|
2020-01-22 11:26:22 +01:00 |
|
prodigal
|
Prodigal: init at 2.6.3
|
2019-04-19 08:38:14 +02:00 |
|
raxml
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
samtools
|
samtools: 1.9 -> 1.10
|
2020-01-19 13:13:01 -08:00 |
|
seaview
|
seaview: 5.0 -> 5.0.2
|
2020-03-26 00:25:29 +00:00 |
|
snpeff
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
somatic-sniper
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
sortmerna
|
sortmerna: init at 3.0.3
|
2019-08-27 00:37:43 +02:00 |
|
spades
|
Revert "Revert "Merge master into staging-next""
|
2020-02-05 19:41:25 +01:00 |
|
stacks
|
stacks: 2.41 -> 2.52
|
2020-03-30 16:13:02 -07:00 |
|
star
|
star: 2.7.2b -> 2.7.3a
|
2019-11-03 10:23:05 +01:00 |
|
strelka
|
strelka: fix build w/ gcc9
|
2019-12-30 03:18:19 +01:00 |
|
sumatools
|
treewide: replace make/build/configure/patchFlags with nix lists
|
2019-12-30 12:58:11 +01:00 |
|
svaba
|
svaba: init at 1.1.0
|
2019-12-08 14:51:05 +01:00 |
|
tebreak
|
tebreak: init at 1.0
|
2019-12-29 17:16:10 +11:00 |
|
trimal
|
trimal: init at 1.4.1
|
2019-06-14 16:31:39 +02:00 |
|
truvari
|
truvari:1.3.2->1.3.4
|
2020-03-02 09:15:58 +01:00 |
|
varscan
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
vcftools
|
treewide: name -> pname (easy cases) (#66585)
|
2019-08-15 13:41:18 +01:00 |
|
xenomapper
|
python.pkgs wide: fix problematic urls
|
2020-01-10 21:02:12 -08:00 |
