R. RyanTM 9528bf9fd9 bowtie2: 2.4.2 -> 2.4.3		2021-05-16 02:53:03 -04:00
..
ants
aragorn
bayescan
bcftools	lzma: deprecate alias	2021-04-04 19:49:52 +02:00
bedops	bedops: init 2.4.39	2021-03-28 22:27:51 -04:00
bedtools	lzma: deprecate alias	2021-04-04 19:49:52 +02:00
bftools
blast
bowtie
bowtie2	bowtie2: 2.4.2 -> 2.4.3	2021-05-16 02:53:03 -04:00
bppsuite
bwa
cd-hit	cd-hit: fix darwin build (#123026)	2021-05-14 17:27:16 -04:00
clustal-omega
cmtk
conglomerate
dcm2niix	dcm2niix: 1.0.20201102 -> 1.0.20210317	2021-05-02 11:10:40 +00:00
deeptools
delly	lzma: deprecate alias	2021-04-04 19:49:52 +02:00
diamond
ecopcr
eggnog-mapper	treewide: makeWrapper buildInputs to nativeBuildInputs	2021-02-19 20:09:16 +07:00
emboss
est-sfs
exonerate
EZminc
fastp
freebayes	lzma: deprecate alias	2021-04-04 19:49:52 +02:00
hisat2
hmmer
igv
inormalize
itsx
iv
kallisto
kent	lzma: deprecate alias	2021-04-04 19:49:52 +02:00
kssd
last	last: 1178 -> 1179	2021-02-21 21:24:17 +00:00
lumpy
MACS2	macs2: init at 2.2.7.1	2021-04-14 10:17:53 -04:00
macse
manta
megahit
meme-suite	meme-suite: init at 5.1.1 (#118603)	2021-04-05 22:43:27 +02:00
messer-slim	messer-slim: 3.2.1 -> 3.6	2021-03-04 18:40:37 +00:00
migrate
minc-tools
minc-widgets
minia
minimap2
mni_autoreg
mosdepth
mrbayes
mrtrix
muscle
N3
ncbi-tools
neuron
niftyreg
niftyseg
obitools
octopus	octopus: 0.7.3 -> 0.7.4	2021-05-11 08:46:00 +10:00
paml
picard-tools	picard-tools: 2.25.0 -> 2.25.1	2021-03-26 03:16:44 +00:00
platypus	treewide: makeWrapper buildInputs to nativeBuildInputs	2021-02-19 20:09:16 +07:00
plink-ng
poretools
prodigal	treewide: add targetPrefix to hardcoded references to CC=cc	2021-02-20 01:01:46 +07:00
quast
raxml
sambamba	sambamba: 0.7.1 -> 0.8.0	2021-03-18 17:41:30 +02:00
samblaster
samtools
seaview
snpeff	treewide: unzip buildInputs to nativeBuildInputs (#112302)	2021-02-20 16:01:53 -05:00
somatic-sniper
sortmerna
spades	SPAdes: 3.15.1 -> 3.15.2 + fix license and platform	2021-03-23 10:51:01 +01:00
stacks	stacks: 2.53 -> 2.55	2021-03-09 17:19:55 +00:00
star	star: 2.7.7a -> 2.7.8a	2021-02-23 10:38:00 +00:00
strelka
sumatools
svaba	lzma: deprecate alias	2021-04-04 19:49:52 +02:00
tebreak
trimal
truvari
varscan	treewide: makeWrapper buildInputs to nativeBuildInputs	2021-02-19 20:09:16 +07:00
vcftools
whisper
xenomapper