07be047a91
julia: update rmath-julia hash for 0.1 (cherry picked from commit ea9f3fca6587494f25ef470397b32904e2325e23)
188 lines
5.5 KiB
Nix
188 lines
5.5 KiB
Nix
{ stdenv, fetchgit, fetchurl, fetchzip
|
|
# build tools
|
|
, gfortran, m4, makeWrapper, patchelf, perl, which, python2
|
|
, runCommand
|
|
, paxctl
|
|
# libjulia dependencies
|
|
, libunwind, readline, utf8proc, zlib
|
|
, llvm, libffi, ncurses
|
|
# standard library dependencies
|
|
, curl, fftwSinglePrec, fftw, gmp, libgit2, mpfr, openlibm, openspecfun, pcre2
|
|
# linear algebra
|
|
, openblas, arpack, suitesparse
|
|
# Darwin frameworks
|
|
, CoreServices, ApplicationServices
|
|
}:
|
|
|
|
with stdenv.lib;
|
|
|
|
# All dependencies must use the same OpenBLAS.
|
|
let
|
|
arpack_ = arpack;
|
|
suitesparse_ = suitesparse;
|
|
in
|
|
let
|
|
arpack = arpack_.override { inherit openblas; };
|
|
suitesparse = suitesparse_.override { inherit openblas; };
|
|
in
|
|
|
|
let
|
|
dsfmtVersion = "2.2.3";
|
|
dsfmt = fetchurl {
|
|
url = "http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/SFMT/dSFMT-src-${dsfmtVersion}.tar.gz";
|
|
sha256 = "03kaqbjbi6viz0n33dk5jlf6ayxqlsq4804n7kwkndiga9s4hd42";
|
|
};
|
|
|
|
libuvVersion = "8d5131b6c1595920dd30644cd1435b4f344b46c8";
|
|
libuv = fetchurl {
|
|
url = "https://api.github.com/repos/JuliaLang/libuv/tarball/${libuvVersion}";
|
|
sha256 = "1886r04igcs0k24sbb61wn10f8ki35c39jsnc5djv3rg4hvn9l49";
|
|
};
|
|
|
|
rmathVersion = "0.1";
|
|
rmath-julia = fetchurl {
|
|
url = "https://api.github.com/repos/JuliaLang/Rmath-julia/tarball/v${rmathVersion}";
|
|
sha256 = "1qyps217175qhid46l8f5i1v8i82slgp23ia63x2hzxwfmx8617p";
|
|
};
|
|
|
|
virtualenvVersion = "15.0.0";
|
|
virtualenv = fetchurl {
|
|
url = "mirror://pypi/v/virtualenv/virtualenv-${virtualenvVersion}.tar.gz";
|
|
sha256 = "06fw4liazpx5vf3am45q2pdiwrv0id7ckv7n6zmpml29x6vkzmkh";
|
|
};
|
|
in
|
|
|
|
stdenv.mkDerivation rec {
|
|
pname = "julia";
|
|
version = "0.5.2";
|
|
name = "${pname}-${version}";
|
|
|
|
src = fetchzip {
|
|
url = "https://github.com/JuliaLang/${pname}/releases/download/v${version}/${name}.tar.gz";
|
|
sha256 = "1616f53dj7xc0g2iys8qfbzal6dx55nswnws5g5r44dlbf4hcl0h";
|
|
};
|
|
prePatch = ''
|
|
mkdir deps/srccache
|
|
cp "${dsfmt}" "./deps/srccache/dsfmt-${dsfmtVersion}.tar.gz"
|
|
cp "${rmath-julia}" "./deps/srccache/Rmath-julia-${rmathVersion}.tar.gz"
|
|
cp "${libuv}" "./deps/srccache/libuv-${libuvVersion}.tar.gz"
|
|
cp "${virtualenv}" "./deps/srccache/virtualenv-${virtualenvVersion}.tar.gz"
|
|
'';
|
|
|
|
patches = [
|
|
./0001.1-use-system-utf8proc.patch
|
|
./0002-use-system-suitesparse.patch
|
|
] ++ stdenv.lib.optional stdenv.needsPax ./0004-hardened.patch;
|
|
|
|
postPatch = ''
|
|
patchShebangs . contrib
|
|
for i in backtrace replutil cmdlineargs compile; do
|
|
mv test/$i.jl{,.off}
|
|
touch test/$i.jl
|
|
done
|
|
'';
|
|
|
|
buildInputs = [
|
|
arpack fftw fftwSinglePrec gmp libgit2 libunwind mpfr
|
|
pcre2.dev openblas openlibm openspecfun readline suitesparse utf8proc
|
|
zlib llvm
|
|
]
|
|
++ stdenv.lib.optionals stdenv.isDarwin [CoreServices ApplicationServices]
|
|
;
|
|
|
|
nativeBuildInputs = [ curl gfortran m4 makeWrapper patchelf perl python2 which ]
|
|
++ stdenv.lib.optional stdenv.needsPax paxctl;
|
|
|
|
makeFlags =
|
|
let
|
|
arch = head (splitString "-" stdenv.system);
|
|
march = { "x86_64" = "x86-64"; "i686" = "pentium4"; }."${arch}"
|
|
or (throw "unsupported architecture: ${arch}");
|
|
# Julia requires Pentium 4 (SSE2) or better
|
|
cpuTarget = { "x86_64" = "x86-64"; "i686" = "pentium4"; }."${arch}"
|
|
or (throw "unsupported architecture: ${arch}");
|
|
in [
|
|
"ARCH=${arch}"
|
|
"MARCH=${march}"
|
|
"JULIA_CPU_TARGET=${cpuTarget}"
|
|
"PREFIX=$(out)"
|
|
"prefix=$(out)"
|
|
"SHELL=${stdenv.shell}"
|
|
|
|
"USE_SYSTEM_BLAS=1"
|
|
"USE_BLAS64=${if openblas.blas64 then "1" else "0"}"
|
|
"LIBBLAS=-lopenblas"
|
|
"LIBBLASNAME=libopenblas"
|
|
|
|
"USE_SYSTEM_LAPACK=1"
|
|
"LIBLAPACK=-lopenblas"
|
|
"LIBLAPACKNAME=libopenblas"
|
|
|
|
"USE_SYSTEM_SUITESPARSE=1"
|
|
"SUITESPARSE_LIB=-lsuitesparse"
|
|
"SUITESPARSE_INC=-I${suitesparse}/include"
|
|
|
|
"USE_SYSTEM_ARPACK=1"
|
|
"USE_SYSTEM_FFTW=1"
|
|
"USE_SYSTEM_GMP=1"
|
|
"USE_SYSTEM_LIBGIT2=1"
|
|
"USE_SYSTEM_LIBUNWIND=1"
|
|
|
|
"USE_SYSTEM_LLVM=1"
|
|
"LLVM_VER=3.8.1"
|
|
|
|
"USE_SYSTEM_MPFR=1"
|
|
"USE_SYSTEM_OPENLIBM=1"
|
|
"USE_SYSTEM_OPENSPECFUN=1"
|
|
"USE_SYSTEM_PATCHELF=1"
|
|
"USE_SYSTEM_PCRE=1"
|
|
"PCRE_CONFIG=${pcre2.dev}/bin/pcre2-config"
|
|
"PCRE_INCL_PATH=${pcre2.dev}/include/pcre2.h"
|
|
"USE_SYSTEM_READLINE=1"
|
|
"USE_SYSTEM_UTF8PROC=1"
|
|
"USE_SYSTEM_ZLIB=1"
|
|
];
|
|
|
|
NIX_CFLAGS_COMPILE = [ "-fPIC" ];
|
|
|
|
LD_LIBRARY_PATH = makeLibraryPath [
|
|
arpack fftw fftwSinglePrec gmp libgit2 mpfr openblas openlibm
|
|
openspecfun pcre2 suitesparse llvm
|
|
];
|
|
|
|
dontStrip = true;
|
|
dontPatchELF = true;
|
|
|
|
enableParallelBuilding = true;
|
|
|
|
doCheck = !stdenv.isDarwin;
|
|
checkTarget = "testall";
|
|
# Julia's tests require read/write access to $HOME
|
|
preCheck = ''
|
|
export HOME="$NIX_BUILD_TOP"
|
|
'';
|
|
|
|
preBuild = ''
|
|
sed -e '/^install:/s@[^ ]*/doc/[^ ]*@@' -i Makefile
|
|
sed -e '/[$](DESTDIR)[$](docdir)/d' -i Makefile
|
|
export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}
|
|
'';
|
|
|
|
postInstall = ''
|
|
for prog in "$out/bin/julia" "$out/bin/julia-debug"; do
|
|
wrapProgram "$prog" \
|
|
--prefix LD_LIBRARY_PATH : "$LD_LIBRARY_PATH:$out/lib/julia" \
|
|
--prefix PATH : "${stdenv.lib.makeBinPath [ curl ]}"
|
|
done
|
|
'';
|
|
|
|
meta = {
|
|
description = "High-level performance-oriented dynamical language for technical computing";
|
|
homepage = https://julialang.org/;
|
|
license = stdenv.lib.licenses.mit;
|
|
maintainers = with stdenv.lib.maintainers; [ raskin ];
|
|
platforms = [ "i686-linux" "x86_64-linux" "x86_64-darwin" ];
|
|
broken = stdenv.isi686;
|
|
};
|
|
}
|